| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824445
Identifier: 148824445
GI number: 148824445
Start: 3634027
End: 3634869
Strand: Reverse
Name: 148824445
Synonym: TBFG_13272
Alternate gene names: NA
Gene position: 3634869-3634027 (Counterclockwise)
Preceding gene: 148824446
Following gene: 148824444
Centisome position: 82.15
GC content: 66.9
Gene sequence:
>843_bases ATGTCGCCAAGAGTTCCCCGGCTGCGTTGGGATGATCCCTTCCGTGCCTTGGACATGCTGGCCTCGCTGTGGTCGTCGAC CGGGATGTCGCTGGTCAGCGCGGGAGCCGCCCAGGCAGTTGCGGCGCCCTACCGGACGTTGTTCACCACCTTGCAGCAGC TGCTCATCGGCAAGGAAGTCACGGTTCGGATTGGGGACCATGACGTGGTGCTGACCGTCACCGAGCTGGACTCGGCACTG GAACCGCAGGGGCTGGCCGTCGGCCAGCTGGGCGAGGTTCGGGTGGCCGCTCGCGGCATCAGCTGGGATCAGCATCATTT GCACAGCGCCGTTGCCGTCCTGCGCAACGTGCACATCCGCCCGGGTGTGCCGCCGCTGGTGATCGCCGCTCCCGTCGAGT TGTCGTCCGCCCTGCCGACCGAGATTTTCGATGATGTGCTCCGTCAAGCGACGCCGCAGCTGCGCGGTGAGTTGTCCGAG AGCGGAGCGGCCCGGCTGCGCTGGGCGCGCCGGCCCGACTGGGGAGGTCTTGAGGTCGACGTCGACGTGGCGGGCACAAC CTCCCAGACGACACTGTGGCTGCGACCGCGCACCGTGATCACCGGACAACGGCGGTGGACACTGCCGGCACGGACACCGG CCTACCGAGTGCCACTGCCTGAGCTGCCGCATGGGCTGCGCATCACCGACGTCAGCCTCGCAGCCGATTGTTTGCAGCTC TCTGCGTTGCTTCCGGAGTGGCGAACGGAGCTGCCGCTGCGTTATCTGGAAAGCGTGATTACCCAATTGAGTCAGGGTGC GCTCAGCTTTGTCTGGCCGCCGCTGCGCAGCGGCGCCGATTGA
Upstream 100 bases:
>100_bases GTGCCGGGGGCGGCGCCGGTATTGCCCGGATGAGTGCTGTGCCTGCGTTTTTCGCGACCTGAGCACACCGGCTACCCTCG CAGTGAGGAGGCGCTTGTTG
Downstream 100 bases:
>100_bases CAGCACTGCTGTCACCGGTGACCGCGACACTTGGTGTGTGCTTGACCTCGTCCTGCCGCTGGAATGCGGTGGCTGCGGTG CGCCGGCGACCCGCTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEVTVRIGDHDVVLTVTELDSAL EPQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTEIFDDVLRQATPQLRGELSE SGAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVITGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQL SALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD
Sequences:
>Translated_280_residues MSPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEVTVRIGDHDVVLTVTELDSAL EPQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTEIFDDVLRQATPQLRGELSE SGAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVITGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQL SALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD >Mature_279_residues SPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEVTVRIGDHDVVLTVTELDSALE PQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTEIFDDVLRQATPQLRGELSES GAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVITGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQLS ALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30690; Mature: 30558
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEV CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCE TVRIGDHDVVLTVTELDSALEPQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIR EEEECCCEEEEEEEHHCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC PGVPPLVIAAPVELSSALPTEIFDDVLRQATPQLRGELSESGAARLRWARRPDWGGLEVD CCCCCEEEECCCHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCHHHEEECCCCCCCCEEEE VDVAGTTSQTTLWLRPRTVITGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQL EEECCCCCCEEEEECCCEEEECCEEEECCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHH SALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure SPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEV CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCE TVRIGDHDVVLTVTELDSALEPQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIR EEEECCCEEEEEEEHHCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC PGVPPLVIAAPVELSSALPTEIFDDVLRQATPQLRGELSESGAARLRWARRPDWGGLEVD CCCCCEEEECCCHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCHHHEEECCCCCCCCEEEE VDVAGTTSQTTLWLRPRTVITGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQL EEECCCCCCEEEEECCCEEEECCEEEECCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHH SALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA