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The map label for this gene is lpqB [H]

Identifier: 148824446

GI number: 148824446

Start: 3634937

End: 3636688

Strand: Reverse

Name: lpqB [H]

Synonym: TBFG_13273

Alternate gene names: 148824446

Gene position: 3636688-3634937 (Counterclockwise)

Preceding gene: 148824447

Following gene: 148824445

Centisome position: 82.2

GC content: 67.58

Gene sequence:

>1752_bases
ATGCGGCTGACAATTTTGTTGTTCCTTGGTGCAGTGCTGGCCGGCTGTGCCAGTGTGCCCAGCACGTCGGCCCCGCAAGC
CATCGGAACCGTCGAACGTCCGGTGCCGTCGAATCTGCCCAAACCGAGCCCGGGTATGGATCCCGACGTGCTGTTACGCG
AGTTCCTCAAGGCCACAGCCGACCCGGCCAACCGGCACCTGGCGGCGCGTCAGTTCCTCACCGAATCGGCTTCCAACGCC
TGGGACGACGCCGGCAGCGCGTTGTTGATCGACCACGTGGTGTTCGTCGAAACCCGAAGCGCCGAGAAGGTTTCGGTGAC
CATGCGGGCAGACATTCTCGGCTCGCTCTCGGATGTGGGGGTGTTTGAGACCGCCGAGGGTCAACTGCCGGATCCGGGCC
CGATCGAGTTGGTCAAGACGTCCGATGGTTGGCGCATCGATCGCCTACCCAACGGGGTTTTCCTGGACTGGCAGCAGTTC
CAAGAAACGTACAAGCGCAACACCCTGTACTTCGCCGACCCCACCGGCAAGACCGTGGTTCCCGATCCGCGCTACGTCGC
GGTGTCCGACCGCGACCAGCTGGCCACGGAGCTCGTCTCCAAACTGCTGGCGGGTCCACGCCCGGAGATGGCGCGCACGG
TGCGTAATCTGCTCGCTCCGCCGCTACGACTGCGCGGGCCGGTGACTCGGGCCGACGGCGGAAAGAGCGGAATCGGCCGC
GGGTACGGCGGCGCGCGAGTCGACATGGAGAAGCTGTCCACCACCGATCCGCACAGCAGGCAATTACTTGCCGCACAGAT
CATCTGGACCTTGGCCAGGGCCGACATCAGGGGGCCGTACGTGATCAACGCCGACGGCGCCCCGCTGGAAGACAGGTTTG
CCGAGGGGTGGACCACTTCCGATGTCGCGGCCACCGACCCGGGGGTGGCCGACGGTGCCGCCGCGGGGTTGCACGCCTTG
GTGAACGGATCACTGGTGGCGATGGACGCACAGCGAGTCACCCCCGTGCCCGGGGCCTTCGGACGGATGCCGGAGCAGAC
GGCGGCCGCCGTATCACGCAGCGGGCGTCAGGTGGCCTCGGTGGTGACGCTGGGGCGCGGGGCTCCGGATGAGGCGGCGT
CTTTGTGGGTCGGCGACCTCGGCGGCGAGGCGGTGCAGTCCGCCGACGGGCACAGCCTGTCGCGGCCCAGCTGGTCGCTG
GACGACGCGGTCTGGGTGGTGGTCGATACCAACGTCGTGCTGCGAGCGATACAGGACCCGGCATCGGGGCAACCCGCGCG
GATTCCGGTGGATTCGACCGCGGTGGCCAGCCGCTTCCCGGGGGCGATCAACGATCTTCAACTGTCCCGTGACGGGACGC
GCGCCGCGATGGTGATCGGTGGGCAGGTGATCCTCGCCGGCGTCGAGCAGACCCAGGCTGGCCAGTTCGCCCTGACCTAC
CCTCGGCGGCTGGGTTTCGGGCTGGGTTCCTCGGTGGTGTCGTTGTCCTGGCGAACCGGTGACGACATCGTGGTGACACG
CACCGACGCCGCCCATCCGGTGTCTTATGTAAACCTCGACGGGGTGAACTCCGACGCGCCGTCCCGCGGGTTGCAAACTC
CACTGACGGCGATCGCGGCCAACCCGTCGACTGTGTATGTCGCCGGCCCGCAAGGGGTGTTGATGTACTCGGCGTCTGTC
GAAAGCCGACCAGGCTGGGCGGACGTACCGGGGCTGATGGTGCCGGGGGCGGCGCCGGTATTGCCCGGATGA

Upstream 100 bases:

>100_bases
AGCCAGTTCTGCAACCGGTCGCGCAACCGAATCCGCAACCGATGCCACCGGAATACAAGGAACGTCAGCGCCCACGTGAG
CACGCGGAGTGGAGCGGTTG

Downstream 100 bases:

>100_bases
GTGCTGTGCCTGCGTTTTTCGCGACCTGAGCACACCGGCTACCCTCGCAGTGAGGAGGCGCTTGTTGATGTCGCCAAGAG
TTCCCCGGCTGCGTTGGGAT

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSDGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLSRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG

Sequences:

>Translated_583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSDGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLSRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG
>Mature_583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSDGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLSRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606
- InterPro:   IPR018910 [H]

Pfam domain/function: PF10646 Germane; PF10647 Gmad1 [H]

EC number: NA

Molecular weight: Translated: 61152; Mature: 61152

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATA
CEEEHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
DPANRHLAARQFLTESASNAWDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVG
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEHHHHHCHHHCC
VFETAEGQLPDPGPIELVKTSDGWRIDRLPNGVFLDWQQFQETYKRNTLYFADPTGKTVV
EEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCEEC
PDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
CCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTS
CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCC
DVAATDPGVADGAAAGLHALVNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVAS
CCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCHHEEH
VVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLSRPSWSLDDAVWVVVDTNVVLRAIQDP
HHHHCCCCCCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHCCC
ASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEC
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAA
HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEC
NPSTVYVAGPQGVLMYSASVESRPGWADVPGLMVPGAAPVLPG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATA
CEEEHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
DPANRHLAARQFLTESASNAWDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVG
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEHHHHHCHHHCC
VFETAEGQLPDPGPIELVKTSDGWRIDRLPNGVFLDWQQFQETYKRNTLYFADPTGKTVV
EEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCEEC
PDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
CCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTS
CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCC
DVAATDPGVADGAAAGLHALVNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVAS
CCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHCCHHEEH
VVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLSRPSWSLDDAVWVVVDTNVVLRAIQDP
HHHHCCCCCCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHCCC
ASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEC
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAA
HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEC
NPSTVYVAGPQGVLMYSASVESRPGWADVPGLMVPGAAPVLPG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]