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The map label for this gene is nudC [H]

Identifier: 148824395

GI number: 148824395

Start: 3583367

End: 3584308

Strand: Reverse

Name: nudC [H]

Synonym: TBFG_13222

Alternate gene names: 148824395

Gene position: 3584308-3583367 (Counterclockwise)

Preceding gene: 148824396

Following gene: 148824393

Centisome position: 81.01

GC content: 66.56

Gene sequence:

>942_bases
GTGACGAACGTAAGCGGCGTGGATTTTCAGCTGAGAAGCGTTCCGTTGCTTTCGCGCGTCGGCGCCGACCGGGCCGACCG
GCTGAGGACCGACATGGAGGCGGCCGCCGCGGGATGGCCAGGCGCGGCATTGCTGCGGGTGGATTCCCGCAATCGCGTGC
TGGTCGCCAACGGCCGGGTGTTGCTTGGCGCGGCCATCGAGCTGGCCGACAAGCCACCGCCAGAGGCGGTATTCCTGGGT
CGCGTCGAGGGCGGCCGCCACGTCTGGGCGGTGCGGGCAGCGCTGCAGCCGATCGCTGATCCCGACATACCAGCCGAGGC
GGTGGACCTTCGTGGGCTCGGCCGAATCATGGACGACACCAGCAGCCAACTGGTGTCGTCGGCATCGGCGCTGTTGAACT
GGCATGACAACGCACGATTCAGCGCCCTAGACGGCGCGCCGACGAAACCGGCCAGGGCCGGCTGGTCACGGGTCAACCCG
ATCACCGGTCATGAGGAGTTCCCCCGTATCGACCCGGCGGTGATCTGCCTGGTTCACGACGGCGCTGATCGTGCCGTGTT
GGCTCGCCAGGCGGCGTGGCCGGAACGGATGTTCTCGCTGTTGGCTGGCTTTGTCGAGGCCGGAGAGTCGTTCGAAGTCT
GCGTCGCCCGGGAGATCCGCGAGGAAATCGGCCTGACCGTTCGCGATGTGCGCTATCTGGGCAGCCAGCAGTGGCCGTTC
CCGCGGTCGTTAATGGTTGGCTTTCATGCCTTGGGTGACCCGGATGAGGAGTTCTCGTTCAGCGACGGCGAAATCGCCGA
AGCCGCGTGGTTCACCCGCGATGAGGTGCGCGCAGCGCTTGCCGCCGGCGATTGGTCCAGTGCGTCGGAGTCGAAACTGC
TACTGCCCGGGTCGATCTCGATCGCCCGCGTGATCATCGAATCGTGGGCAGCGTGCGAATGA

Upstream 100 bases:

>100_bases
GCCAGCGACCGGCTGCTCTATATTCGCCAGGTGGGGCGCTAGTGGCGATCGCAAGCGCGGCGGAGCCGGGCGCGGCGGGT
CGCCACCAGGTGGGGCGCCA

Downstream 100 bases:

>100_bases
AAGTCCACGTCGTTAACCCGCGATCTTTACCAGCTTCGCTTTGACCTCGTCCGCGCTCGGGTTAGTCAGCGTCGACCCGT
CGGCGAACTTCACCGTGGGA

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTNVSGVDFQLRSVPLLSRVGADRADRLRTDMEAAAAGWPGAALLRVDSRNRVLVANGRVLLGAAIELADKPPPEAVFLG
RVEGGRHVWAVRAALQPIADPDIPAEAVDLRGLGRIMDDTSSQLVSSASALLNWHDNARFSALDGAPTKPARAGWSRVNP
ITGHEEFPRIDPAVICLVHDGADRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRYLGSQQWPF
PRSLMVGFHALGDPDEEFSFSDGEIAEAAWFTRDEVRAALAAGDWSSASESKLLLPGSISIARVIIESWAACE

Sequences:

>Translated_313_residues
MTNVSGVDFQLRSVPLLSRVGADRADRLRTDMEAAAAGWPGAALLRVDSRNRVLVANGRVLLGAAIELADKPPPEAVFLG
RVEGGRHVWAVRAALQPIADPDIPAEAVDLRGLGRIMDDTSSQLVSSASALLNWHDNARFSALDGAPTKPARAGWSRVNP
ITGHEEFPRIDPAVICLVHDGADRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRYLGSQQWPF
PRSLMVGFHALGDPDEEFSFSDGEIAEAAWFTRDEVRAALAAGDWSSASESKLLLPGSISIARVIIESWAACE
>Mature_312_residues
TNVSGVDFQLRSVPLLSRVGADRADRLRTDMEAAAAGWPGAALLRVDSRNRVLVANGRVLLGAAIELADKPPPEAVFLGR
VEGGRHVWAVRAALQPIADPDIPAEAVDLRGLGRIMDDTSSQLVSSASALLNWHDNARFSALDGAPTKPARAGWSRVNPI
TGHEEFPRIDPAVICLVHDGADRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRYLGSQQWPFP
RSLMVGFHALGDPDEEFSFSDGEIAEAAWFTRDEVRAALAAGDWSSASESKLLLPGSISIARVIIESWAACE

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=227, Percent_Identity=37.0044052863436, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI13899267, Length=265, Percent_Identity=31.3207547169811, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI48994995, Length=154, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71986510, Length=119, Percent_Identity=37.8151260504202, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI212645999, Length=119, Percent_Identity=37.8151260504202, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321371, Length=216, Percent_Identity=30.0925925925926, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 33827; Mature: 33695

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVSGVDFQLRSVPLLSRVGADRADRLRTDMEAAAAGWPGAALLRVDSRNRVLVANGRV
CCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCE
LLGAAIELADKPPPEAVFLGRVEGGRHVWAVRAALQPIADPDIPAEAVDLRGLGRIMDDT
EEEEEEECCCCCCCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
SSQLVSSASALLNWHDNARFSALDGAPTKPARAGWSRVNPITGHEEFPRIDPAVICLVHD
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GADRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRYLGSQQWPF
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
PRSLMVGFHALGDPDEEFSFSDGEIAEAAWFTRDEVRAALAAGDWSSASESKLLLPGSIS
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHH
IARVIIESWAACE
HHHHHHHHHHCCC
>Mature Secondary Structure 
TNVSGVDFQLRSVPLLSRVGADRADRLRTDMEAAAAGWPGAALLRVDSRNRVLVANGRV
CCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCE
LLGAAIELADKPPPEAVFLGRVEGGRHVWAVRAALQPIADPDIPAEAVDLRGLGRIMDDT
EEEEEEECCCCCCCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
SSQLVSSASALLNWHDNARFSALDGAPTKPARAGWSRVNPITGHEEFPRIDPAVICLVHD
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GADRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRYLGSQQWPF
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
PRSLMVGFHALGDPDEEFSFSDGEIAEAAWFTRDEVRAALAAGDWSSASESKLLLPGSIS
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHH
IARVIIESWAACE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]