| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is yraQ [C]
Identifier: 148824152
GI number: 148824152
Start: 3326709
End: 3327929
Strand: Direct
Name: yraQ [C]
Synonym: TBFG_12977
Alternate gene names: 148824152
Gene position: 3326709-3327929 (Clockwise)
Preceding gene: 148824150
Following gene: 148824153
Centisome position: 75.19
GC content: 61.51
Gene sequence:
>1221_bases GTGACCTCAACCAAAGTGGAGGACCGAGTGACGGCAGCAGTGCTGGGAGCGATCGGGCACGCACTGGCGCTGACCGCGTC GATGACCTGGGAAATCCTGTGGGCGCTGATCCTGGGCTTCGCGCTGTCGGCGGTGGTTCAAGCCGTGGTGCGCCGCTCCA CGATCGTCACGCTGCTCGGCGACGATCGGCCGCGCACCCTGGTAATCGCCACCGGCCTGGGCGCGGCCTCGTCGTCGTGC TCGTATGCCGCGGTGGCTTTGGCTCGGTCACTATTCCGCAAAGGGGCCAACTTCACTGCCGCTATGGCGTTCGAGATCGG TTCCACCAACCTCGTGGTGGAGTTGGGCATCATCCTGGCCCTGCTGATGGGCTGGCAGTTCACCGCCGCCGAGTTCGTTG GCGGTCCAATAATGATCCTTGTCCTGGCCGTGTTGTTCCGGTTGTTCGTCGGCGCCCGGCTCATCGACGCCGCCCGGGAA CAGGCCGAACGGGGACTCGCAGGCTCGATGGAAGGCCATGCCGCCATGGACATGTCCATCAAGCGGGAAGGCTCATTTTG GCGACGACTCCTTTCCCCACCGGGATTTACCTCCATCGCCCATGTGTTCGTGATGGAGTGGTTGGCGATCCTGCGCGACC TCATTCTCGGGCTGCTGATCGCCGGTGCTATCGCGGCATGGGTACCCGAATCGTTCTGGCAGAGCTTCTTTTTAGCCAAT CATCCGGCCTGGTCGGCGGTCTGGGGTCCGATCATAGGACCCATCGTGGCCATCGTTTCGTTTGTTTGCTCGATCGGCAA CGTGCCACTTGCCGCGGTGCTGTGGAACGGAGGCATCAGCTTCGGCGGGGTCATCGCGTTCATCTTCGCCGACCTACTGA TACTGCCGATCCTGAATATCTACCGTAAATACTATGGCGCCAGGATGATGCTGGTGCTGCTCGGCACCTTCTACGCATCG ATGGTCGTCGCTGGCTATCTCATCGAACTTCTCTTCGGTACAACGAATCTCATCCCGAGCCAGCGCAGCGCTACGGTCAT GACCGCAGAAATATCGTGGAACTACACCACCTGGCTCAACGTCATCTTTCTGGTGATCGCGGCGGCCTTGGTGGTCCGAT TCATCACATCGGGCGGTCTCCCGATGCTACGCATGATGGGCGGCTCACCGGATGCCCCGCATGACCACCATGACCGCCAC GACGATCACCTCGGCCACTAG
Upstream 100 bases:
>100_bases CGGCAAGAGTGGGGCGGCGATACGTTTAGCGGCACCACTGCGCGGTCGTTGCCCACCCCGGTGACTATACCCCCGGGTGG TATATGGTGGAGGGCAGAGC
Downstream 100 bases:
>100_bases CGCCACCACGCCGATCAGTCGGCGCCGAAAAGGCCACCGGCGGCGGTATCCTGGCCTGCGGGTATTCCACCCATGGGCAA AGGGAGCATGACCGCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Ion Permease; Conserved Membrane Protein Transporter; Permease Superfamily; Integral Membrane Protein
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLGDDRPRTLVIATGLGAASSSC SYAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILALLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAARE QAERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWLAILRDLILGLLIAGAIAAWVPESFWQSFFLAN HPAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLILPILNIYRKYYGARMMLVLLGTFYAS MVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTTWLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRH DDHLGH
Sequences:
>Translated_406_residues MTSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLGDDRPRTLVIATGLGAASSSC SYAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILALLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAARE QAERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWLAILRDLILGLLIAGAIAAWVPESFWQSFFLAN HPAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLILPILNIYRKYYGARMMLVLLGTFYAS MVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTTWLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRH DDHLGH >Mature_405_residues TSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLGDDRPRTLVIATGLGAASSSCS YAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILALLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAAREQ AERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWLAILRDLILGLLIAGAIAAWVPESFWQSFFLANH PAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLILPILNIYRKYYGARMMLVLLGTFYASM VVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTTWLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHD DHLGH
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43729; Mature: 43598
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC DDRPRTLVIATGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILA CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHH LLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAAREQAERGLAGSMEGHAAMDMSI HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHH KREGSFWRRLLSPPGFTSIAHVFVMEWLAILRDLILGLLIAGAIAAWVPESFWQSFFLAN HHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLILPILNI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHH YRKYYGARMMLVLLGTFYASMVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTTWLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHH VIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHDDHLGH HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC DDRPRTLVIATGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILA CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHH LLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAAREQAERGLAGSMEGHAAMDMSI HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHH KREGSFWRRLLSPPGFTSIAHVFVMEWLAILRDLILGLLIAGAIAAWVPESFWQSFFLAN HHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLILPILNI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHH YRKYYGARMMLVLLGTFYASMVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTTWLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHH VIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHDDHLGH HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA