| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824150
Identifier: 148824150
GI number: 148824150
Start: 3324756
End: 3325145
Strand: Direct
Name: 148824150
Synonym: TBFG_12975
Alternate gene names: NA
Gene position: 3324756-3325145 (Clockwise)
Preceding gene: 148824146
Following gene: 148824152
Centisome position: 75.15
GC content: 65.64
Gene sequence:
>390_bases GTGGAGCACGGCAATCCGCATGACGCGCCGCAGCTAGCGCCCGCGGTCGAACGGATCACCACACGCGCCGGACGCCCGCC CGGCACCGTCACCGCCGACCGCGGCTACGGCGAGAAACGCGTCGAAGATGACCTGCACGACCTCGGTGTACGTACGGTCG CGATACCGCGTAAAGGCAGACCCTCCCAGGCCCGGCGCGCCGAAGAACAACGGCCATCGTTCCGACGAACAGTCAAGTGG CGCACCGGCAGCGAAGGCCGCATCAGCACCCTCAAACGAAACTACGGTTGGAACCGCTCCTGCATCGACGGCACCGAAGG AACCCGGATCTGGACCAGGCACGGCATCCTCACCCACAACCTCATCAAGATCAGCAGCCTCGCAGCATGA
Upstream 100 bases:
>100_bases CCGTGGCGTTCCTCCCCACGGCAGAAGGCCGGGGCCGGTCGAGTTCGGGCACAAGCCCCAGATCGTCGACAACGACGATG GCATCGTCCTGGATCACACC
Downstream 100 bases:
>100_bases CCCGGCTCCCAGAGCACGAAGCTCTGCCCCACCAACAGTCCGGCGGCATTCGCCCACAAACGACTCACTTAGTCGCCGTC ACTTTTTCAGGTCGAAGTAA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Transposase IS4 Family Protein; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGRPSQARRAEEQRPSFRRTVKW RTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHNLIKISSLAA
Sequences:
>Translated_129_residues MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGRPSQARRAEEQRPSFRRTVKW RTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHNLIKISSLAA >Mature_129_residues MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGRPSQARRAEEQRPSFRRTVKW RTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHNLIKISSLAA
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14488; Mature: 14488
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGR CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEECCCCCC PSQARRAEEQRPSFRRTVKWRTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHN CHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHH LIKISSLAA HHHHHHHCC >Mature Secondary Structure MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGR CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEECCCCCC PSQARRAEEQRPSFRRTVKWRTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHN CHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHH LIKISSLAA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA