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The map label for this gene is fdhD

Identifier: 148824088

GI number: 148824088

Start: 3220105

End: 3220935

Strand: Reverse

Name: fdhD

Synonym: TBFG_12913

Alternate gene names: 148824088

Gene position: 3220935-3220105 (Counterclockwise)

Preceding gene: 148824089

Following gene: 148824087

Centisome position: 72.8

GC content: 64.98

Gene sequence:

>831_bases
GTGGGGTACGCAACGGCGCATCGGCGGGTCAGGCATCTCAGCGCCGATCAGGTGATCACCCGGCCGGAAACCTTGGCCGT
CGAGGAGCCGCTGGAGATCCGCGTCAATGGGACGCCGGTTACCGTGACCATGCGCACGCCAGGATCGGATTTCGAACTGG
TGCAAGGCTTTCTGCTTGCCGAAGGGGTGGTTGCGCACCGCGAAGACGTGCTGACCGTTAGCTACTGTGGCAGGCGCGTC
GAGGGCAATGCCACAGGGGCCAGCACGTACAACGTTTTGGATGTGGCTCTGGCGCCCGGCGTCAAGCCGCCCGATGTCGA
TGTCACCCGCACCTTCTACACCACCTCGTCGTGCGGAGTCTGTGGTAAGGCGTCGCTTCAGGCGGTGAGCCAGGTCAGCC
GATTCGCACCGGGCGGCGATCCCGCTACCGTCGCCGCCGACACTCTCAAGGCGATGCCGGACCAACTTCGGCGCGCGCAA
AAGGTTTTCGCGAGAACCGGTGGGCTGCACGCTGCGGCACTATTCGGGGTGGACGGCGCCATGCTTGCCGTGCGTGAGGA
TATCGGCCGGCACAATGCGGTCGACAAGGTCATCGGCTGGGCTTTCGAGCGTGACCGAATACCGCTTGGCGCCTCGGTGT
TGTTGGTCAGCGGGCGGGCGTCGTTCGAGTTGACCCAAAAGGCGCTGATGGCTGGGATTCCGGTGCTGGCCGCGGTATCC
GCGCCGTCGTCGCTGGCGGTTTCGTTGGCCGACGCGTCCGGGATCACGCTGGTGGCTTTCCTGCGGGGGGACTCGATGAA
CGTCTACACCAGAGCGGACCGAATCACCTAA

Upstream 100 bases:

>100_bases
ACCCGGAGACCAATCCGCTGGTTCCGCTCGACCATACCGCGGCCCAATCGAACACCCCGGTGTCGAAGGCGATCATCGTG
CGATTGGAGCCAACGGCCTA

Downstream 100 bases:

>100_bases
CGGGACTCTTCCGGCGCCGAACATGATGTTGCTGGATCGGCGTGTGCCGCCTGCGGTGCGTTGCGAGTAGCCGGGACCCG
AGAAGTTGCTATGTGACGGA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MGYATAHRRVRHLSADQVITRPETLAVEEPLEIRVNGTPVTVTMRTPGSDFELVQGFLLAEGVVAHREDVLTVSYCGRRV
EGNATGASTYNVLDVALAPGVKPPDVDVTRTFYTTSSCGVCGKASLQAVSQVSRFAPGGDPATVAADTLKAMPDQLRRAQ
KVFARTGGLHAAALFGVDGAMLAVREDIGRHNAVDKVIGWAFERDRIPLGASVLLVSGRASFELTQKALMAGIPVLAAVS
APSSLAVSLADASGITLVAFLRGDSMNVYTRADRIT

Sequences:

>Translated_276_residues
MGYATAHRRVRHLSADQVITRPETLAVEEPLEIRVNGTPVTVTMRTPGSDFELVQGFLLAEGVVAHREDVLTVSYCGRRV
EGNATGASTYNVLDVALAPGVKPPDVDVTRTFYTTSSCGVCGKASLQAVSQVSRFAPGGDPATVAADTLKAMPDQLRRAQ
KVFARTGGLHAAALFGVDGAMLAVREDIGRHNAVDKVIGWAFERDRIPLGASVLLVSGRASFELTQKALMAGIPVLAAVS
APSSLAVSLADASGITLVAFLRGDSMNVYTRADRIT
>Mature_275_residues
GYATAHRRVRHLSADQVITRPETLAVEEPLEIRVNGTPVTVTMRTPGSDFELVQGFLLAEGVVAHREDVLTVSYCGRRVE
GNATGASTYNVLDVALAPGVKPPDVDVTRTFYTTSSCGVCGKASLQAVSQVSRFAPGGDPATVAADTLKAMPDQLRRAQK
VFARTGGLHAAALFGVDGAMLAVREDIGRHNAVDKVIGWAFERDRIPLGASVLLVSGRASFELTQKALMAGIPVLAAVSA
PSSLAVSLADASGITLVAFLRGDSMNVYTRADRIT

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=260, Percent_Identity=32.3076923076923, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_MYCBO (P64119)

Other databases:

- EMBL:   BX248344
- RefSeq:   NP_856568.1
- ProteinModelPortal:   P64119
- SMR:   P64119
- EnsemblBacteria:   EBMYCT00000015705
- GeneID:   1092184
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2923c
- GeneTree:   EBGT00050000017150
- HOGENOM:   HBG732883
- OMA:   GRAHTAN
- ProtClustDB:   PRK00724
- BioCyc:   MBOV233413:MB2923C-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 29091; Mature: 28959

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYATAHRRVRHLSADQVITRPETLAVEEPLEIRVNGTPVTVTMRTPGSDFELVQGFLLA
CCCHHHHHHHHHCCCCHHCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHHHH
EGVVAHREDVLTVSYCGRRVEGNATGASTYNVLDVALAPGVKPPDVDVTRTFYTTSSCGV
HHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCC
CGKASLQAVSQVSRFAPGGDPATVAADTLKAMPDQLRRAQKVFARTGGLHAAALFGVDGA
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
MLAVREDIGRHNAVDKVIGWAFERDRIPLGASVLLVSGRASFELTQKALMAGIPVLAAVS
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEC
APSSLAVSLADASGITLVAFLRGDSMNVYTRADRIT
CCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure 
GYATAHRRVRHLSADQVITRPETLAVEEPLEIRVNGTPVTVTMRTPGSDFELVQGFLLA
CCHHHHHHHHHCCCCHHCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHHHH
EGVVAHREDVLTVSYCGRRVEGNATGASTYNVLDVALAPGVKPPDVDVTRTFYTTSSCGV
HHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCC
CGKASLQAVSQVSRFAPGGDPATVAADTLKAMPDQLRRAQKVFARTGGLHAAALFGVDGA
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
MLAVREDIGRHNAVDKVIGWAFERDRIPLGASVLLVSGRASFELTQKALMAGIPVLAAVS
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEC
APSSLAVSLADASGITLVAFLRGDSMNVYTRADRIT
CCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972