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The map label for this gene is yraN [C]

Identifier: 148824087

GI number: 148824087

Start: 3219471

End: 3219896

Strand: Reverse

Name: yraN [C]

Synonym: TBFG_12912

Alternate gene names: 148824087

Gene position: 3219896-3219471 (Counterclockwise)

Preceding gene: 148824088

Following gene: 148824086

Centisome position: 72.78

GC content: 67.84

Gene sequence:

>426_bases
GTGGCAGGTGATGTCGGGGCCAGCGTGCAGGTTGGCCGCATGACAACCCTGAAGACGATGACTCGGGTTCAGCTGGGAGC
GATGGGCGAGGCCCTAGCGGTGGACTACCTGACCAGCATGGGGTTGCGGATCTTGAACCGCAACTGGCGTTGCCGCTACG
GCGAGCTGGACGTGATCGCCTGCGACGCTGCCACCCGCACGGTGGTGTTCGTCGAGGTCAAGACCCGCACCGGCGACGGT
TATGGGGGGCTCGCGCACGCGGTGACCGAGCGCAAGGTTCGCCGCCTGCGTCGCCTGGCCGGGCTGTGGCTGGCCGACCA
GGAAGAGCGCTGGGCTGCGGTGCGCATCGATGTGATCGGCGTGCGAGTCGGCCCCAAGAATTCAGGCCGCACCCCAGAGC
TCACCCACCTGCAGGGGATCGGCTGA

Upstream 100 bases:

>100_bases
TGACAAGGACGCGGTGTCGTGATCCCGCGCAGTACTGGGGCTGTGGACAGGGCCGCGACTGGGGATAACTGGTCGTCGCG
GCATCGGTGAGACGCGATTC

Downstream 100 bases:

>100_bases
TGGCGCTGGGGCGTGCGTTCTCGGTCGCGGTGCGGGGGCTGGACGGCGAGATCGTGGAAATCGAAGCCGACATCACCTCA
GGGTTGCCGGGTGTGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAGDVGASVQVGRMTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDG
YGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG

Sequences:

>Translated_141_residues
MAGDVGASVQVGRMTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDG
YGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG
>Mature_140_residues
AGDVGASVQVGRMTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGY
GGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 15452; Mature: 15321

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDVGASVQVGRMTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIA
CCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEECCCEEEEE
CDAATRTVVFVEVKTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIG
ECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
VRVGPKNSGRTPELTHLQGIG
EEECCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
AGDVGASVQVGRMTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIA
CCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEECCCEEEEE
CDAATRTVVFVEVKTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIG
ECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
VRVGPKNSGRTPELTHLQGIG
EEECCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]