| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824012
Identifier: 148824012
GI number: 148824012
Start: 3140973
End: 3143411
Strand: Reverse
Name: 148824012
Synonym: TBFG_12837
Alternate gene names: NA
Gene position: 3143411-3140973 (Counterclockwise)
Preceding gene: 148824013
Following gene: 148824011
Centisome position: 71.05
GC content: 61.46
Gene sequence:
>2439_bases ATGAACCCGCAACTCATCGAGGCCATAATCGGCTGCCTCTTGCACGACATTGGCAAACCGGTCCAGCGCGCGGCGCTCGG CTACCCGGGCAGGCACAGTGCGATTGGCCGCGCTTTTATGAAGAAGGTGTGGTTGCGCGACAGCCGCAATCCGTCGCAGT TCACCGACGAGGTGGATGAGGCTGACATTGGGGTCTCCGACCGCCGCATTCTCGACGCGATCAGCTATCACCACAGTTCT GCGCTGCGTACGGCGGCCGAGAATGGCCGCCTTGCCGCCGATGCGCCGGCCTACATCGCCTACATCGCCGACAATATCGC GGCCGGAACCGACCGCCGCAAGGCCGACTCCGACGACGGCCATGGTGCGAGCACTTGGGATCCGGACACGCCCCTGTATT CGATGTTCAACCGATTCGGCTCCGGCACAGCGAATCTGGCATTTGCCCCGGAGATGCTCGACGACCGCAAGCCGATCAAT ATACCGTCGCCACGCCGGATCGAATTCGACAAGGACCGCTACGCCGCCATCGTCAACAAACTTAAAGCCATTCTGGTCGA CCTCGAACGTTCCGACACCTACCTCGCCAGCCTCCTCAACGTCCTCGAGGCGACGCTGTCGTTCGTGCCGTCCTCGACCG ACGCGTCCGAGGTCGTCGACGTCTCACTCTTCGACCACCTGAAGCTGACGGGTGCGCTCGGCGCCTGCATCTGGCACTAC CTACAAGCCACCGGACAAAGCGACTTCAAGTCAGCGCTGTTCGACAAGCAGGACACCTTCTACAACGAAAAAGCCTTCCT GCTCACAACTTTCGACGTCTCAGGCATCCAGGACTTCATCTACACGATCCATTCCTCGGGTGCCGCGAAGATGCTGCGTG CCCGCAGCTTCTACCTGGAGATGCTGACCGAGCATCTCATCGACGAGCTACTTGCGCGGGTGGGTCTCAGCCGCGCGAAT CTCAACTACTCCGGCGGCGGGCACGCGTACCTGCTGCTGCCCAACACGGAGTCCGCGCGGAAATCCGTCGAACAGTTCGA GCGTGAGGCCAACGACTGGCTGCTGGAAAACTTCGCAACCCGGCTCTTCATCGCCACGGGTAGCGTACCGCTTGCCGCGA ACGACCTGATGCGTCGGCCGAACGAGAGTGCGAGCCAGGCAAGTAACCGCGCCCTCCGCTACAGCGGGCTCTACCGTGAG TTGAGCGAGCAACTTTCCGCGAAGAAGCTCGCCCGATACAGCGCTGACCAACTGCGGGAACTCAACTCGCGCGATCACGA CGGTCAGAAAGGTGACCGGGAATGCAGCGTGTGCCACACGGTCAACCGCACGGTCAGCGCCGACGACGAGCCAAAGTGCA GCCTGTGCCAAGCGCTGACCGCTGCGTCTTCGCAGATTCAATCCGAGTCTCGCCGCTTCCTACTCATCTCTGACGGCGCC ACCAAAGGTCTGCCCCTGCCGTTCGGCGCCACACTCACGTTCTGTAGCCGAGCCGACGCCGATAAGGCACTCCAGCAACC CCAAACCCGAAGGCGGTACGCGAAGAACAAGTTCTTCGCCGGCGAGTGTTTGGGCACCGGGCTCTGGGTGGGCGACTACG TCGCACAGATGGAGTTCGGTGACTACGTGAAGCGTGCGAGCGGAATCGCGCGCCTCGGGGTTCTGCGCCTTGACGTCGAT AACCTGGGCCAGGCATTCACGCACGGCTTCATGGAGCAAGGCAACGGCAAGTTCAACACGATTAGCCGCACGGCCGCGTT CTCCCGGATGCTGTCGTTGTTCTTCCGGCAGCACATCAACTACGTGTTGGCACGCCCGAAACTGCGCCCGATCACCGGCG ATGACCCGGCGCGGCCCCGCGAGGCCACGATCATCTACTCCGGTGGCGATGACGTCTTCGTCGTGGGCGCGTGGGACGAC GTCATCGAGTTCGGGATCGAGCTTCGGGAGCGGTTCCACGAATTCACCCAGGGCAAACTCACCGTGTCGGCTGGCATCGG CATGTTCCCCGACAAGTACCCCATCTCCGTGATGGCCCGCGAAGTCGGAGATCTCGAAGACGCGGCGAAGTCGCTGCCCG GCAAGAACGGGGTTGCACTCTTCGATCGCGAGTTCACCTTCGGCTGGGATGAGCTGCTCAGCAAGGTGATCGAGGAGAAG TACCGGCACATCGCCGACTATTTCAGTGGCAACGAAGAACGCGGCATGGCCTTCATCTACAAGCTGCTCGAACTACTCGC CGAACGCGACGATCGAATCACAAAGGCCAGATGGGTGTACTTCCTCACGCGCATGCGTAACCCCACCGGTGACACAGCGC CTTTTCAGCAGTTTGCTAACCGGCTACACCAATGGTTCCAAGATCCGACAGACGCCAAGCAACTCAAGACCGCGCTGCAC CTCTACATCTATCGCACTCGCAAGGAGGAGTCCGAATGA
Upstream 100 bases:
>100_bases GGTTCGGGGAGTTCTCGGGATGCGGAATAAAGGCATCCATGGGGATGGGCGCGATCCGGGTCCAGCCACTGGCACCGAGG GAAAAATGCGTACCGAAGCC
Downstream 100 bases:
>100_bases GCGTCATCCAAGACGACTATGTGAAACAGGCCGAAGTAATTCGCGGCCTGCCAAAGAAAAAGAACGGCTTCGAGCTGACC ACAACCCAGCTGCGGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH LYIYRTRKEESE
Sequences:
>Translated_812_residues MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH LYIYRTRKEESE >Mature_812_residues MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH LYIYRTRKEESE
Specific function: Unknown
COG id: COG1353
COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013408 - InterPro: IPR000160 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91048; Mature: 91048
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDE CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC HGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNK CCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLE HHHCCCHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH MLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFAT HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRE EEEEEECCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA HCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFG CCCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH DYVKRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHIN HHHHHHCCHHHHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKL HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCE TVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK EEECCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFAN HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RLHQWFQDPTDAKQLKTALHLYIYRTRKEESE HHHHHHCCCCHHHHHHHHHHHHHHECCCCCCC >Mature Secondary Structure MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDE CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC HGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNK CCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLE HHHCCCHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH MLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFAT HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRE EEEEEECCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA HCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFG CCCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH DYVKRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHIN HHHHHHCCHHHHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKL HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCE TVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK EEECCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFAN HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RLHQWFQDPTDAKQLKTALHLYIYRTRKEESE HHHHHHCCCCHHHHHHHHHHHHHHECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]