| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824013
Identifier: 148824013
GI number: 148824013
Start: 3143408
End: 3144352
Strand: Reverse
Name: 148824013
Synonym: TBFG_12838
Alternate gene names: NA
Gene position: 3144352-3143408 (Counterclockwise)
Preceding gene: 148824014
Following gene: 148824012
Centisome position: 71.07
GC content: 62.96
Gene sequence:
>945_bases TTGGCTGCTCGCCGAGGCGGCATCAGAAGGACGGATCTGCTACGTCGGAGTGGCCAGCCCCGAGGCCGACATCGCGCGAG TGCGGCGGAATCAGGCTTGACCTGGATTTCACCAACGCTTATTCTGGTGGGCTTTTCTCACCGAGGAGATCGCCGGATGA CGGAACACTTGTCGCGATTGACGCTGACTCTAGAGGTTGATGCCCCGCTCGAACGCGCGAGGGTGGCGACCCTGGGGCCG CATCTTCATGGCGTCCTCATGGAGTCGATCCCGGCCGATTATGTGCAGACCCTCCACACCGTGCCGGTGAACCCGTACAG TCAGTACGCGCTGGCCCGCTCGACCACATCTTTGGAGTGGAAGATCAGCACGCTGACGAACGAGGCGCGGCAGCAGATCG TCGGACCTATCAACGACGCGGCGTTTGCGGGTTTTCGGCTCCGTGCGAGCGGGATAGCGACACAGGTCACGTCGCGATCG CTGGAGCAGAACCCGCTAAGTCAATTCGCGCGCATTTTCTACGCGCGGCCCGAGACGCGCAAGTTCCGGGTCGAGTTCCT GACGCCTACCGCATTCAAGCAATCCGGCGAGTACGTGTTCTGGCCGGATCCGCGGCTCGTGTTTCAGAGTCTCGCGCAGA AGTACGGTGCAATTGTCGACGGCGAAGAGCCCGATCCTGGCCTCATCGCCGAATTCGGTCAGTCGGTTCGCCTCTCCGCG TTCCGGGTGGCGTCGGCCCCGTTCGCGGTGGGCGCGGCGCGTGTTCCCGGCTTCACCGGCTCGGCCACGTTCACCGTCCG CGGTGTGGATACTTTTGCGAGCTATATCGCGGCGCTGTTGTGGTTCGGGGAGTTCTCGGGATGCGGAATAAAGGCATCCA TGGGGATGGGCGCGATCCGGGTCCAGCCACTGGCACCGAGGGAAAAATGCGTACCGAAGCCATGA
Upstream 100 bases:
>100_bases GGCGTCAATTGACGGCGCGGGCAACAGCAGCATTGGCGGCGCCATCCTCCGCGCGGCCGGCGCCCACCGCTACAACCCCG GCTCGTTAGGAAGCCATCCC
Downstream 100 bases:
>100_bases ACCCGCAACTCATCGAGGCCATAATCGGCTGCCTCTTGCACGACATTGGCAAACCGGTCCAGCGCGCGGCGCTCGGCTAC CCGGGCAGGCACAGTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MAARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRLTLTLEVDAPLERARVATLGP HLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEWKISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRS LEQNPLSQFARIFYARPETRKFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSA FRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIRVQPLAPREKCVPKP
Sequences:
>Translated_314_residues MAARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRLTLTLEVDAPLERARVATLGP HLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEWKISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRS LEQNPLSQFARIFYARPETRKFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSA FRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIRVQPLAPREKCVPKP >Mature_313_residues AARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRLTLTLEVDAPLERARVATLGPH LHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEWKISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRSL EQNPLSQFARIFYARPETRKFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSAF RVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIRVQPLAPREKCVPKP
Specific function: Unknown
COG id: COG5551
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34433; Mature: 34302
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRL CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHE TLTLEVDAPLERARVATLGPHLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEW EEEEEECCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCEEE KISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRSLEQNPLSQFARIFYARPETR EEHHHHHHHHHHHCCCCCHHHHCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCC KFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSA EEEEEEECCHHHHCCCCEEECCCHHHHHHHHHHHHCCEECCCCCCCCHHHHHCCCCEEEE FRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIR EEECCCCHHHCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE VQPLAPREKCVPKP EECCCCHHHCCCCC >Mature Secondary Structure AARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRL CCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHE TLTLEVDAPLERARVATLGPHLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEW EEEEEECCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCEEE KISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRSLEQNPLSQFARIFYARPETR EEHHHHHHHHHHHCCCCCHHHHCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCC KFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSA EEEEEEECCHHHHCCCCEEECCCHHHHHHHHHHHHCCEECCCCCCCCHHHHHCCCCEEEE FRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIR EEECCCCHHHCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE VQPLAPREKCVPKP EECCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA