| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824006
Identifier: 148824006
GI number: 148824006
Start: 3135596
End: 3136612
Strand: Reverse
Name: 148824006
Synonym: TBFG_12831
Alternate gene names: NA
Gene position: 3136612-3135596 (Counterclockwise)
Preceding gene: 148824007
Following gene: 148824005
Centisome position: 70.89
GC content: 60.87
Gene sequence:
>1017_bases ATGGTGCAGCTGTATGTCTCGGACTCCGTGTCGCGGATCAGCTTTGCCGACGGCCGGGTGATCGTGTGGAGCGAGGAGCT CGGCGAGAGCCAGTATCCGATCGAGACGCTGGACGGCATCACGCTGTTTGGGCGGCCGACGATGACAACGCCCTTCATCG TTGAGATGCTCAAGCGTGAGCGCGACATCCAGCTCTTCACGACCGACGGCCACTACCAGGGCCGGATCTCAACACCCGAC GTGTCATACGCGCCGCGGCTCCGTCAGCAAGTTCACCGCACCGACGATCCTGCGTTCTGCCTGTCGTTAAGCAAGCGGAT CGTGTCGAGGAAGATCCTGAATCAGCAGGCCTTGATTCGGGCACACACGTCGGGGCAAGACGTTGCTGAGAGCATCCGCA CGATGAAGCACTCGCTGGCCTGGGTCGATCGATCGGGCTCCCTGGCGGAGTTGAACGGGTTCGAGGGAAATGCCGCAAAG GCATACTTCACCGCGCTGGGGCATCTCGTCCCGCAGGAGTTCGCATTCCAGGGCCGCTCGACTCGGCCGCCGTTGGACGC CTTCAACTCGATGGTCAGCCTCGGCTATTCGCTGCTGTACAAGAACATCATAGGGGCGATCGAGCGTCACAGCCTGAACG CGTATATCGGTTTCCTACACCAGGATTCACGAGGGCACGCAACGTTGGCGAGCGACCTCATGGAGGTATGGCGGGCGCCG ATCATCGATGACACCGTACTTCGATTGATCGCGGACGGTGTGGTCGACACCCGGGCTTTCAGCAAGAACTCCGACACGGG GGCCGTCTTCGCGACACGGGAAGCCACACGATCCATCGCGCGCGCCTTTGGTAATCGAATCGCACGAACCGCCACCTACA TCAAAGGCGATCCTCACCGATACACCTTTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCC GGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAA
Upstream 100 bases:
>100_bases CGCCCGCGAAACAGGCGCTGATTTGACGCTCTATGACCGGTTGAACGACGAGATCATCCGGCAGATTGATATGGCACCGC TGGGCTAACAGGTGCGCAAG
Downstream 100 bases:
>100_bases ATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTT CGTCCTCGTAATATACGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MVQLYVSDSVSRISFADGRVIVWSEELGESQYPIETLDGITLFGRPTMTTPFIVEMLKRERDIQLFTTDGHYQGRISTPD VSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIRAHTSGQDVAESIRTMKHSLAWVDRSGSLAELNGFEGNAAK AYFTALGHLVPQEFAFQGRSTRPPLDAFNSMVSLGYSLLYKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAP IIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSIARAFGNRIARTATYIKGDPHRYTFQYALDLQLQSLVRVIEA GHPSRLVDIDITSEPSGA
Sequences:
>Translated_338_residues MVQLYVSDSVSRISFADGRVIVWSEELGESQYPIETLDGITLFGRPTMTTPFIVEMLKRERDIQLFTTDGHYQGRISTPD VSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIRAHTSGQDVAESIRTMKHSLAWVDRSGSLAELNGFEGNAAK AYFTALGHLVPQEFAFQGRSTRPPLDAFNSMVSLGYSLLYKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAP IIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSIARAFGNRIARTATYIKGDPHRYTFQYALDLQLQSLVRVIEA GHPSRLVDIDITSEPSGA >Mature_338_residues MVQLYVSDSVSRISFADGRVIVWSEELGESQYPIETLDGITLFGRPTMTTPFIVEMLKRERDIQLFTTDGHYQGRISTPD VSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIRAHTSGQDVAESIRTMKHSLAWVDRSGSLAELNGFEGNAAK AYFTALGHLVPQEFAFQGRSTRPPLDAFNSMVSLGYSLLYKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAP IIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSIARAFGNRIARTATYIKGDPHRYTFQYALDLQLQSLVRVIEA GHPSRLVDIDITSEPSGA
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002729 - InterPro: IPR019858 [H]
Pfam domain/function: PF01867 DUF48 [H]
EC number: NA
Molecular weight: Translated: 37664; Mature: 37664
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQLYVSDSVSRISFADGRVIVWSEELGESQYPIETLDGITLFGRPTMTTPFIVEMLKRE CEEEEEECCCCEEEECCCEEEEEEHHCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHCC RDIQLFTTDGHYQGRISTPDVSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIR CCEEEEEECCCEECEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE AHTSGQDVAESIRTMKHSLAWVDRSGSLAELNGFEGNAAKAYFTALGHLVPQEFAFQGRS ECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCC TRPPLDAFNSMVSLGYSLLYKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCC IIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSIARAFGNRIARTATYIKGDPHR CCHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCE YTFQYALDLQLQSLVRVIEAGHPSRLVDIDITSEPSGA EEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MVQLYVSDSVSRISFADGRVIVWSEELGESQYPIETLDGITLFGRPTMTTPFIVEMLKRE CEEEEEECCCCEEEECCCEEEEEEHHCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHCC RDIQLFTTDGHYQGRISTPDVSYAPRLRQQVHRTDDPAFCLSLSKRIVSRKILNQQALIR CCEEEEEECCCEECEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE AHTSGQDVAESIRTMKHSLAWVDRSGSLAELNGFEGNAAKAYFTALGHLVPQEFAFQGRS ECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCC TRPPLDAFNSMVSLGYSLLYKNIIGAIERHSLNAYIGFLHQDSRGHATLASDLMEVWRAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCC IIDDTVLRLIADGVVDTRAFSKNSDTGAVFATREATRSIARAFGNRIARTATYIKGDPHR CCHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCE YTFQYALDLQLQSLVRVIEAGHPSRLVDIDITSEPSGA EEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]