| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824007
Identifier: 148824007
GI number: 148824007
Start: 3136625
End: 3137872
Strand: Reverse
Name: 148824007
Synonym: TBFG_12832
Alternate gene names: NA
Gene position: 3137872-3136625 (Counterclockwise)
Preceding gene: 148824008
Following gene: 148824006
Centisome position: 70.92
GC content: 59.62
Gene sequence:
>1248_bases ATGATCCTGTTCTCGCCTATCGGAACTGCGGACCCGATCACCGCGCTCGGCGACGGCCCGATGCTACACATCGTCCGCCA CTATCGACCAATAGTTGTCGTGCTATTCCTCAGCGCCGAGATAGCTGCCTTTGAGAACGCGGACCGGCGGTACTCCGCGG CAATCACGCGGCTCGCGCCTGAGACCGACGTTCGCATAGTCACCTATACCAACCCGTCGGTGCACAGGTTCGACCTTTTC GTGCCGGTTTTCCGCAACCACCTGGTTGAACTGTCGGCTGAGTTCCCTGATCGAACCATTCTGCTGAATACCAGTTCCGG CACCCCTGCGATGCAGGCGGCGCTGGTGGCCATAAATGTGTTTGGCATTCCCAGGACCACCGCTGTGCAAGTAAGCACGC CTGCCCGGGCATTGAGCAAGCCTGGCGATCGTGAATCCCCAGACGCTTACGACCTCGAACTAATGTGGGACGCAAACGAC GACAATCAGCCTGGAGCCCCCAACCGTTGCTTTGAGGCGACTTCCGCTGCGCTCGGCGCGCTGCTTGAGCGGGCCAACCT GAAGCAGCTGATCGTGTCGTACGACTACTCGGCAGCAGTGACGATCGCGGCAGACTCGCGCCTGCCCGATCAAGTGAGCA ATCTGATCCGCGGCGCGATGCACCGCTCGAGGCTGGAACACCTCGTAGCGCCAAAGTTCTTTAAGGACACCGCGTTCACG TATGACCCCGCGAACAAGGTCGCTGAGTACATAAGTGCTCTTGCGCTGCTGGCAAAGCGCGAGCAATGGGCTGAATTCGC ACGATCAGCTACCCCGGCAATCACTATCGTGCTCAGGGCGGCTGTGGCAAAACACCTTCCGGAGGACCGCTATCTCGACG ACATGGGCCGCGTCGACCGCCGAAAGCTGGAAAGAGAGCCGGAGATACGGTGCGCGCTCAAGCACCCTCCGAAATCGCCA AACGCGGAGTGGTACCTCTACACCAAGGACTGGCTCGCACTGCTCCGCCAATTCGCACCCGATCGAGTTGGTGCTCTTGA AGTACTCGGAAGGTTCGAGAGCCGGGTCCGCAACACCGCAGCACACGAGATCGTCTCAATCAGTGAGGATCGCATCACGA AGGATGGCGGCCTTCTCCCAGAACAACTGCTGAAGATCCTCGCCCGCGAAACAGGCGCTGATTTGACGCTCTATGACCGG TTGAACGACGAGATCATCCGGCAGATTGATATGGCACCGCTGGGCTAA
Upstream 100 bases:
>100_bases CGCGCGAACTACGCGTCTCACCACTTGTCTTGAAGCGAACCAAGATCGACAACATATGCTACGAGATGGGTCAGTGCGAG CTGTCGATCAGGAGAGCCGA
Downstream 100 bases:
>100_bases CAGGTGCGCAAGATGGTGCAGCTGTATGTCTCGGACTCCGTGTCGCGGATCAGCTTTGCCGACGGCCGGGTGATCGTGTG GAGCGAGGAGCTCGGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MILFSPIGTADPITALGDGPMLHIVRHYRPIVVVLFLSAEIAAFENADRRYSAAITRLAPETDVRIVTYTNPSVHRFDLF VPVFRNHLVELSAEFPDRTILLNTSSGTPAMQAALVAINVFGIPRTTAVQVSTPARALSKPGDRESPDAYDLELMWDAND DNQPGAPNRCFEATSAALGALLERANLKQLIVSYDYSAAVTIAADSRLPDQVSNLIRGAMHRSRLEHLVAPKFFKDTAFT YDPANKVAEYISALALLAKREQWAEFARSATPAITIVLRAAVAKHLPEDRYLDDMGRVDRRKLEREPEIRCALKHPPKSP NAEWYLYTKDWLALLRQFAPDRVGALEVLGRFESRVRNTAAHEIVSISEDRITKDGGLLPEQLLKILARETGADLTLYDR LNDEIIRQIDMAPLG
Sequences:
>Translated_415_residues MILFSPIGTADPITALGDGPMLHIVRHYRPIVVVLFLSAEIAAFENADRRYSAAITRLAPETDVRIVTYTNPSVHRFDLF VPVFRNHLVELSAEFPDRTILLNTSSGTPAMQAALVAINVFGIPRTTAVQVSTPARALSKPGDRESPDAYDLELMWDAND DNQPGAPNRCFEATSAALGALLERANLKQLIVSYDYSAAVTIAADSRLPDQVSNLIRGAMHRSRLEHLVAPKFFKDTAFT YDPANKVAEYISALALLAKREQWAEFARSATPAITIVLRAAVAKHLPEDRYLDDMGRVDRRKLEREPEIRCALKHPPKSP NAEWYLYTKDWLALLRQFAPDRVGALEVLGRFESRVRNTAAHEIVSISEDRITKDGGLLPEQLLKILARETGADLTLYDR LNDEIIRQIDMAPLG >Mature_415_residues MILFSPIGTADPITALGDGPMLHIVRHYRPIVVVLFLSAEIAAFENADRRYSAAITRLAPETDVRIVTYTNPSVHRFDLF VPVFRNHLVELSAEFPDRTILLNTSSGTPAMQAALVAINVFGIPRTTAVQVSTPARALSKPGDRESPDAYDLELMWDAND DNQPGAPNRCFEATSAALGALLERANLKQLIVSYDYSAAVTIAADSRLPDQVSNLIRGAMHRSRLEHLVAPKFFKDTAFT YDPANKVAEYISALALLAKREQWAEFARSATPAITIVLRAAVAKHLPEDRYLDDMGRVDRRKLEREPEIRCALKHPPKSP NAEWYLYTKDWLALLRQFAPDRVGALEVLGRFESRVRNTAAHEIVSISEDRITKDGGLLPEQLLKILARETGADLTLYDR LNDEIIRQIDMAPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46232; Mature: 46232
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFSPIGTADPITALGDGPMLHIVRHYRPIVVVLFLSAEIAAFENADRRYSAAITRLAP CEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC ETDVRIVTYTNPSVHRFDLFVPVFRNHLVELSAEFPDRTILLNTSSGTPAMQAALVAINV CCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHEEE FGIPRTTAVQVSTPARALSKPGDRESPDAYDLELMWDANDDNQPGAPNRCFEATSAALGA ECCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LLERANLKQLIVSYDYSAAVTIAADSRLPDQVSNLIRGAMHRSRLEHLVAPKFFKDTAFT HHHHCCHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCE YDPANKVAEYISALALLAKREQWAEFARSATPAITIVLRAAVAKHLPEDRYLDDMGRVDR ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RKLEREPEIRCALKHPPKSPNAEWYLYTKDWLALLRQFAPDRVGALEVLGRFESRVRNTA HHHCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AHEIVSISEDRITKDGGLLPEQLLKILARETGADLTLYDRLNDEIIRQIDMAPLG HHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHCCCCCC >Mature Secondary Structure MILFSPIGTADPITALGDGPMLHIVRHYRPIVVVLFLSAEIAAFENADRRYSAAITRLAP CEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC ETDVRIVTYTNPSVHRFDLFVPVFRNHLVELSAEFPDRTILLNTSSGTPAMQAALVAINV CCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHEEE FGIPRTTAVQVSTPARALSKPGDRESPDAYDLELMWDANDDNQPGAPNRCFEATSAALGA ECCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LLERANLKQLIVSYDYSAAVTIAADSRLPDQVSNLIRGAMHRSRLEHLVAPKFFKDTAFT HHHHCCHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCE YDPANKVAEYISALALLAKREQWAEFARSATPAITIVLRAAVAKHLPEDRYLDDMGRVDR ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RKLEREPEIRCALKHPPKSPNAEWYLYTKDWLALLRQFAPDRVGALEVLGRFESRVRNTA HHHCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AHEIVSISEDRITKDGGLLPEQLLKILARETGADLTLYDRLNDEIIRQIDMAPLG HHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA