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The map label for this gene is yajC

Identifier: 148823783

GI number: 148823783

Start: 2929163

End: 2929510

Strand: Reverse

Name: yajC

Synonym: TBFG_12608

Alternate gene names: NA

Gene position: 2929510-2929163 (Counterclockwise)

Preceding gene: 148823787

Following gene: 148823782

Centisome position: 66.21

GC content: 60.92

Gene sequence:

>348_bases
ATGGAGAGTTTCGTTTTGTTCTTGCCGTTCCTGCTCATCATGGGTGGGTTCATGTACTTCGCGTCGCGCCGCCAGCGACG
GGCCATGCAAGCCACCATCGATCTGCACGACTCGTTGCAGCCCGGGGAGCGGGTACACACGACTTCTGGGCTGGAAGCCA
CCATCGTCGCCATTGCCGACGACACCATCGACCTCGAGATCGCGCCCGGGGTGGTCACCACGTGGATGAAGTTGGCGATT
CGTGACCGAATTCTGCCGGACGACGACATCGACGAGGAGCTCAACGAGGACCTTGACAAGGATGTTGACGACGTGGCCGG
CGAGCGCCGGGTGACCAACGATTCCTGA

Upstream 100 bases:

>100_bases
GGCCTGCCAGACTGGACGGGCACACTGGACTGTTACCAGGTGCGCGGCCCGCGGGTAGGCCTGGCACCGTGATCGCAATA
CCAATACGAAAGACGGGTTG

Downstream 100 bases:

>100_bases
CCGGCAACCGGCCGACCGGAACCGACGAGCCGCTTGCGCGACGCGCCCCGGCGCGACACGTAGGCTCTGTCGGGGGTAGA
AAACTGATTCTCGAGGAGAT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MESFVLFLPFLLIMGGFMYFASRRQRRAMQATIDLHDSLQPGERVHTTSGLEATIVAIADDTIDLEIAPGVVTTWMKLAI
RDRILPDDDIDEELNEDLDKDVDDVAGERRVTNDS

Sequences:

>Translated_115_residues
MESFVLFLPFLLIMGGFMYFASRRQRRAMQATIDLHDSLQPGERVHTTSGLEATIVAIADDTIDLEIAPGVVTTWMKLAI
RDRILPDDDIDEELNEDLDKDVDDVAGERRVTNDS
>Mature_115_residues
MESFVLFLPFLLIMGGFMYFASRRQRRAMQATIDLHDSLQPGERVHTTSGLEATIVAIADDTIDLEIAPGVVTTWMKLAI
RDRILPDDDIDEELNEDLDKDVDDVAGERRVTNDS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Secreted (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0486

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2588_MYCTU (P65025)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   C70726
- RefSeq:   NP_217104.1
- RefSeq:   NP_337164.1
- EnsemblBacteria:   EBMYCT00000003039
- EnsemblBacteria:   EBMYCT00000071376
- GeneID:   887346
- GeneID:   925647
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2665
- KEGG:   mtu:Rv2588c
- TIGR:   MT2665
- TubercuList:   Rv2588c
- GeneTree:   EBGT00050000016474
- HOGENOM:   HBG730023
- OMA:   TIDLHNS
- ProtClustDB:   PRK05886
- InterPro:   IPR003849
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 12967; Mature: 12967

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFVLFLPFLLIMGGFMYFASRRQRRAMQATIDLHDSLQPGERVHTTSGLEATIVAIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEEEC
DTIDLEIAPGVVTTWMKLAIRDRILPDDDIDEELNEDLDKDVDDVAGERRVTNDS
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MESFVLFLPFLLIMGGFMYFASRRQRRAMQATIDLHDSLQPGERVHTTSGLEATIVAIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEEEC
DTIDLEIAPGVVTTWMKLAIRDRILPDDDIDEELNEDLDKDVDDVAGERRVTNDS
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036