Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is ycbL [C]

Identifier: 148823777

GI number: 148823777

Start: 2919406

End: 2920146

Strand: Reverse

Name: ycbL [C]

Synonym: TBFG_12601

Alternate gene names: 148823777

Gene position: 2920146-2919406 (Counterclockwise)

Preceding gene: 148823778

Following gene: 148823775

Centisome position: 66.0

GC content: 65.18

Gene sequence:

>741_bases
GTGTCAAGTGGCCCATGTTCGCGGCCCGCCTCGTCCCCGGACGCCGGGGATGGGAAACTGGGAACCGTGTTGATCACCGG
ATTTCCTGCGGGGTTGCTGGCGTGTAACTGTTATGTGCTGGCCGAGCGGCCCGGAACCGACGCCGTCATCGTCGATCCGG
GCCAGGGTGCGATGGGCACGCTGCGTCGCATCCTCGACAAGAACCGGCTGACCCCTGCCGCGGTGCTGCTCACCCACGGA
CACATCGATCACATCTGGTCCGCGCAGAAGGTCTCAGACACCTTCGGCTGCCCCACCTATGTGCATCCCGCCGACCGGTT
CATGCTGACCGACCCCATCTACGGCCTGGGCCCGCGGATAGCGCAGCTGGTTGCGGGTGCGTTCTTTCGTGAGCCTAAAC
AGGTTGTGGAGCTGGACCGAGACGGCGACAAGATCGACCTCGGCGGCATCTCGGTCAACATCGATCACACACCGGGTCAC
ACCCGCGGGTCGGTGGTCTTCCGGGTCCTGCAGGCGACCAACAACGACAAGGACATCGTGTTCACCGGTGACACCCTGTT
CGAGCGTGCGATAGGCCGCACCGACTTGGCCGGCGGCAGCGGCCGCGACCTGTTGCGCTCCATCGTCGACAAACTCCTGG
TGCTCGACGACAGCACGGTGGTGCTGCCCGGGCACGGCAACTCCACCACCATTGGGGCCGAGCGGCGCTTCAATCCGTTC
CTTGAGGGCTTGAGCCGGTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCTCTAGTTGTCGTTCGAGTTTGCGTTTGGCTGTGGCACGTCGCTGAGCATTGGTCGGCACGAAAGCACAGGC
TAATCGGGGCGCCGCGACCG

Downstream 100 bases:

>100_bases
CGGAATTCTCGTCATTTTCGGCCCCCAAGGGGGTACCGGACTACGTCCCGCCCGACTCGGCGCAGTTCGTCGCGGTGCGC
GACGGGCTGCTCGCGGCGGC

Product: glyoxalase II (hydroxyacylglutathione hydrolase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHG
HIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGH
TRGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF
LEGLSR

Sequences:

>Translated_246_residues
MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHG
HIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGH
TRGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF
LEGLSR
>Mature_245_residues
SSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHGH
IDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHT
RGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPFL
EGLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=218, Percent_Identity=34.4036697247706, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17538952, Length=151, Percent_Identity=31.7880794701987, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221330176, Length=211, Percent_Identity=27.0142180094787, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24667703, Length=188, Percent_Identity=26.063829787234, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24667711, Length=240, Percent_Identity=23.3333333333333, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21356335, Length=188, Percent_Identity=26.063829787234, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26226; Mature: 26095

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGT
CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECCCCCEEEECCCCCHHHH
LRRILDKNRLTPAAVLLTHGHIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRI
HHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHH
AQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKDIV
HHHHHHHHHHCCHHHHHCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
FTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF
EECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEECCHHCCCHH
LEGLSR
HHHHCC
>Mature Secondary Structure 
SSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGT
CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECCCCCEEEECCCCCHHHH
LRRILDKNRLTPAAVLLTHGHIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRI
HHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHH
AQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKDIV
HHHHHHHHHHCCHHHHHCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
FTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF
EECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEECCHHCCCHH
LEGLSR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]