Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823763

Identifier: 148823763

GI number: 148823763

Start: 2905763

End: 2906788

Strand: Reverse

Name: 148823763

Synonym: TBFG_12588

Alternate gene names: NA

Gene position: 2906788-2905763 (Counterclockwise)

Preceding gene: 148823764

Following gene: 148823755

Centisome position: 65.7

GC content: 63.06

Gene sequence:

>1026_bases
ATGCGTGACTTCCACTGTCCAAATTGCGGGCAGCGCCTGGCATTCGAGAACTCCGCCTGCCTGTCGTGCGGCAGCGCGCT
GGGGTTTTCTCTTGGGCGGATGGCGCTGCTGGTCATCGCCGACGACGCCGATGTCCAACTCTGCGCCAATCTCCACCTCG
CGCAATGCAATTGGCTGGTGCCCAGTGATCAGCTCGGCGGACTTTGCAGTTCTTGTGTGCTGACCATCGAGCGTCCCAGC
GATACCAACACCGCCGGGCTGGCGGAGTTCGCCCGAGCCGAAGGTGCCAAGCGGCGGCTGATCGCCGAGCTACACGAGCT
GAAGCTGCCGATCGTCGGCCGCGACCAGGATCCTGACCATGGGTTGGCCTTCCGGCTATTGTCCAGCGCGCACGAGAACG
TGACCACCGGACACCAGAACGGAGTCATCACACTGGATCTCGCCGAAGGCGACGATGTGCATCGGGAGCAGCTGCGGGTC
GAGATGGACGAGCCGTATCGGACCCTGCTTGGGCACTTCCGCCACGAGATCGGGCACTACTACTTCTATCGACTCATCGC
CTCGTCAAGCGACTATCTGTCCCGGTTCAACGAGTTGTTCGGAGACCCGGACGCTGACTACTCCCAGGCGTTGGATCGGC
ATTACCGTGGCGGCCCGCCGGAAGGTTGGCAGGACAGCTTTGTCTCGTCGTATGCGACCATGCACGCGAGTGAGGATTGG
GCCGAGACGTTCGCTCATTACCTGCATATCCGCGACGCCCTGGACACCGCGGCCTGGTGCGGCCTGGCACCGGCGTCGGC
AACCTTCGACCGGCCGGCGTTGGGCCCCAGCGCTTTTAATACCATCATCGACAAGTGGCTGCCGCTGTCGTGGTCGCTGA
ACATGGTCAATCGCTCGATGGGCCACGACGACCTATACCCCTTTGTGCTGCCGGCCGCTGTGCTGGAGAAGATGCGGTTC
ATCCACACCGTCGTCGACGAGGTGGCCCCGGATTTCGAGCCGGCTCACAGCCGTCGCACCGTTTAG

Upstream 100 bases:

>100_bases
GCAGACGTGCCGCCGCTACGCGGCATCATCTACACCAACTCCGAGAACAGTGTGATCGACGTTTCTGTCGATGTCGTGCC
CTTCGAAGGTGATGCGCTGC

Downstream 100 bases:

>100_bases
GCCGGCATCACCCGCCGTTGGTCTGGACCCCACAGCGGTTGCATGCCGCCGGGCAACGCCAACTGAGTGGCGGTGAGGAC
GTCGGCCACGTCACGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS
DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV
EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW
AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF
IHTVVDEVAPDFEPAHSRRTV

Sequences:

>Translated_341_residues
MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS
DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV
EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW
AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF
IHTVVDEVAPDFEPAHSRRTV
>Mature_341_residues
MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS
DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV
EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW
AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF
IHTVVDEVAPDFEPAHSRRTV

Specific function: Unknown

COG id: COG4307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2568_MYCTU (P65009)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   G70723
- RefSeq:   NP_217084.1
- RefSeq:   NP_337143.1
- EnsemblBacteria:   EBMYCT00000001297
- EnsemblBacteria:   EBMYCT00000070275
- GeneID:   887249
- GeneID:   925663
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2644
- KEGG:   mtu:Rv2568c
- TIGR:   MT2644
- TubercuList:   Rv2568c
- GeneTree:   EBGT00050000017633
- HOGENOM:   HBG299788
- OMA:   FGDERQD
- ProtClustDB:   CLSK864027
- InterPro:   IPR011201
- PIRSF:   PIRSF012641

Pfam domain/function: PF10005 DUF2248

EC number: NA

Molecular weight: Translated: 38003; Mature: 38003

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCHHHCCCCC
PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH
CCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW
HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHC
GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCHHHCCCCC
PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH
CCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW
HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHC
GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036