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The map label for this gene is ppe38

Identifier: 148823553

GI number: 148823553

Start: 2643720

End: 2644895

Strand: Reverse

Name: ppe38

Synonym: TBFG_12376

Alternate gene names: 148823553

Gene position: 2644895-2643720 (Counterclockwise)

Preceding gene: 148823556

Following gene: 148823552

Centisome position: 59.78

GC content: 69.39

Gene sequence:

>1176_bases
ATGATTTTGGATTTTTCGTGGTTGCCGCCGGAGATCAACTCGGCGCGGATCTATGCCGGTGCGGGGTCGGGGCCGTTGTT
TATGGCGGCGGCGGCGTGGGAGGGGTTGGCTGCGGATTTGCGGGCCTCGGCGTCCTCGTTTGATGCGGTGATCGCCGGGT
TGGCGGCTGGGCCGTGGTCGGGTCCGGCGTCGGTGGCGATGGCGGGGGCGGCGGCGCCGTATGTGGGGTGGTTGAGTGCG
GCGGCCGGGCAGGCGGAGTTGTCGGCTGGTCAGGCTACCGCGGCGGCGACGGCGTTTGAGGCGGCGTTGGCGGCCACGGT
GCATCCGGCGGCGGTGACGGCGAATCGGGTGTTGTTGGGGGCGTTGGTGGCGACGAACATTTTGGGTCAGAACACGCCGG
CGATTGCGGCCACTGAGTTCGATTATGTGGAGATGTGGGCTCAGGACGTGGGTGCGATGGTGGGGTATCACGCGGGGGCG
GCGGCGGTGGCTGAGACGTTGACGCCGTTTAGTGTGCCGCCGCTGGATTTGGCGGGGTTGGCTTCCCAGGCCGGTGCGCA
GTTGACCGGGATGGCGACGTCGGTTTCGGCTGCGTTGTCTCCGATCGCGGAGGGTGCGGTGGAGGGGGTGCCGGCTGTGG
TGGCTGCGGCGCAGTCGGTGGCGGCGGGGTTGCCGGTGGATGCGGCGCTGCAGGTGGGGCAGGCCGCGGCGTATCCGGCC
AGTATGTTGATTGGGCCGATGATGCAGTTGGCGCAGATGGGGACTACGGCCAACACGGCTGGGTTGGCCGGTGCGGAGGC
TGCGGGGTTGGCTGCGGCGGATGTGCCGACGTTTGCCGGTGATATCGCTTCGGGGACGGGCCTAGGTGGTGCCGGTGGTC
TGGGTGCGGGGATGTCGGCGGAGTTGGGTAAGGCGCGGTTGGTGGGGGCGATGTCGGTGCCTCCGACCTGGGAGGGGTCG
GTTCCTGCGCGGATGGCCAGTTCGGCGATGGCGGGTTTGGGGGCTATGCCTGCTGAGGTGCCGGCGGCAGGCGGGCCCAT
GGGGATGATGCCGATGCCGATGGGTATGGGGGGTGCTGGGGCGGGTATGCCGGCCGGGATGATGGGCCGCGGTGGCGCAA
ATCCGCATGTGGTGCAGGCTCGGCCCAGTGTGGTGCCGCGGGTCGGGATCGGATAG

Upstream 100 bases:

>100_bases
GACATGCCGGGGCGGTTCAGATTTTTGGTGTGGGTTGCTTTAGCATCCGTGATTGGTTTGTGTCTGAGCCGTTGAGGCGG
CTGGCTGGTTTGGGGTTGCG

Downstream 100 bases:

>100_bases
CGCGCAGGGCGCGTCGACGCGGGAGTCATCGCGGCGGCGACGTCGTTGGAAATCCCTGGCCTTGGTGCCGTGATTGTCGG
CGAAATGAAGTGCACCGAAG

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSA
AAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGA
AAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGS
VPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG

Sequences:

>Translated_391_residues
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSA
AAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGA
AAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGS
VPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
>Mature_391_residues
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSA
AAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGA
AAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGS
VPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PPE38_MYCTU (Q7D7A2)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   A70663
- RefSeq:   NP_336898.1
- RefSeq:   YP_177870.1
- HSSP:   Q79FE1
- ProteinModelPortal:   Q7D7A2
- EnsemblBacteria:   EBMYCT00000000232
- EnsemblBacteria:   EBMYCT00000069501
- GeneID:   888959
- GeneID:   925929
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2419
- KEGG:   mtu:Rv2352c
- TIGR:   MT2419
- TubercuList:   Rv2352c
- GeneTree:   EBGT00050000014889
- HOGENOM:   HBG572308
- OMA:   QTELEYV
- ProtClustDB:   CLSK799898
- InterPro:   IPR022171
- InterPro:   IPR000030

Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE

EC number: NA

Molecular weight: Translated: 37355; Mature: 37355

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
CEECCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
CCHHHHHHCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHH
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCH
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCC
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG
CCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
CEECCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
CCHHHHHHCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHH
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCH
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCC
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG
CCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036