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The map label for this gene is ppe40 [H]

Identifier: 148823556

GI number: 148823556

Start: 2647019

End: 2648860

Strand: Reverse

Name: ppe40 [H]

Synonym: TBFG_12379

Alternate gene names: 148823556

Gene position: 2648860-2647019 (Counterclockwise)

Preceding gene: 148823559

Following gene: 148823553

Centisome position: 59.87

GC content: 61.45

Gene sequence:

>1842_bases
ATGCCGGGGCGGTTCAGGATGTTTTTTGGTGCGGGGTCGGGGCCGATGTTGGCGGCGGCGGCGGCCTGGGATGGGTTGGC
GGCTGAGTTGGGGTTGGCGGCGGAGTCGTTTGGGTTGGTGACCTCGGGTCTGGCGGGTGGGTCGGGTCAGGCGTGGCAGG
GTGCGGCGGCGGCGGCGATGGTGGTGGCGGCGGCGCCGTATGCGGGGTGGTTGGCTGCTGCGGCGGCGCGGGCTGGGGGG
GCTGCGGTTCAGGCTAAGGCGGTGGCCGGCGCGTTTGAGGCGGCGCGGGCGGCCATGGTGGATCCGGTGGTGGTGGCGGC
TAATCGCAGTGCGTTTGTGCAGTTGGTGCTGTCGAATGTGTTTGGGCAGAATGCGCCGGCGATTGCCGCTGCTGAGGCCA
CCTATGAGCAGATGTGGGCTGCCGATGTGGCGGCGATGGTGGGTTATCACGGTGGGGCATCGGCGGCGGCGGCGGCGTTG
GCGCCATGGCAGCAGGCGGTGCCGGGCTTGTTGGGCTTGCTAGATAGTGCACAGTCCAGCGCGCAAGCGGTGACCGCCCA
AGCAGTCGGCTCCACCGTGCCTGGGCCTCTGCAGGGCATCAACTTCGGCTTTGGCAACATCGGGTCCCTCAATTTGGGCA
GCGGAAATACCGGTGACACGAACGTCGGCAGCGGCAATATCGGCAACACCAACCTAGGCGGCGGCAATATCGGCAGCTTC
AACCTGGGCAGCGGTAACCAAGGTGACATCAACCTGGGCATCGGTAACGTTGGCAACCTCAACCTGGGCAGCGGAAACTT
CGGTAGCCAAAACCTGGGTAGCGGCAACATCGGCAGCACCAACGTGGGCAGCGGCAACATCGGCAGCACCAACGTGGGCA
GCGGCAACATCGGCGACACGAACTTCGGTAACGGAAACAACGGCAACTTCAACTTTGGTAGCGGCAATACCGGCAGTAAC
AACATCGGCTTCGGAAACACCGGCAGCGGGAATTTCGGTTTCGGAAACACGGGCAACAACAACATCGGTATCGGGCTCAC
CGGCGATGGTCAGATCGGCATCGGCGGACTGAACTCGGGCAGCGGAAACATCGGTTTCGGGAACTCCGGCACCGGAAACG
TCGGTTTGTTCAACTCCGGCACCGGCAACGTAGGCTTCGGGAACTCCGGTACTGCGAACACTGGATTCGGGAACGCGGGC
AACGTCAACACCGGATTTTGGAACGGCGGCAGCACAAACACTGGCCTCGCTAACGCCGGCGCCGGCAACACAGGCTTTTT
CGACGCTGGCAACTACAACTTCGGCAGTCTTAACGCCGGAAACATAAACTCGAGTTTTGGGAATTCGGGTGACGGCAACA
GTGGTTTCCTCAATGCTGGCGACGTCAACTCCGGTGTGGGCAATGCGGGTGATGTCAACACTGGCTTAGGGAACTCGGGC
AACATCAATACTGGTGGGTTTAATCCGGGCACGCTCAACACGGGCTTCTTCAGCGCGATGACCCAAGCTGGTCCGAATTC
GGGCTTCTTCAACGCCGGTACCGGTAACTCTGGTTTCGGGCACAACGACCCGGCTGGCAGTGGCAACTCGGGCATTCAGA
ACTCGGGCTTCGGCAACTCGGGCTATGTCAATACCAGCACCACAAGCATGTTCGGCGGTAACTCAGGGGTGCTCAACACG
GGCTACGGCAACTCAGGTTTCTATAACGCGGCCGTCAACAACACCGGGATTTTTGTGACCGGCGTGATGAGTTCGGGATT
TTTCAATTTTGGGACGGGCAACTCGGGCCTGCTGGTCAGCGGCAATGGGCTTTCGGGTTTCTTCAAGAACTTGTTCGGAT
AG

Upstream 100 bases:

>100_bases
GCGACCATCCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACCCCATCCTTTCC
AAGAACTGGAGTCTCCGGAC

Downstream 100 bases:

>100_bases
TGGTGGTTTCCGTTCGGTAGTGCGATGTAGTTGGTCTAATCACGGTTACCTCACTCGGTATGACGTGACCGTCTGACGGG
ATATTTTTGCCGCCTTATTT

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MPGRFRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQGAAAAAMVVAAAPYAGWLAAAAARAGG
AAVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQLVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAAL
APWQQAVPGLLGLLDSAQSSAQAVTAQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSF
NLGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN
NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAG
NVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSG
NINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNT
GYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG

Sequences:

>Translated_613_residues
MPGRFRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQGAAAAAMVVAAAPYAGWLAAAAARAGG
AAVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQLVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAAL
APWQQAVPGLLGLLDSAQSSAQAVTAQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSF
NLGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN
NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAG
NVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSG
NINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNT
GYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG
>Mature_612_residues
PGRFRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQGAAAAAMVVAAAPYAGWLAAAAARAGGA
AVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQLVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALA
PWQQAVPGLLGLLDSAQSSAQAVTAQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFN
LGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNN
IGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGN
VNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGN
INTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG
YGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002989
- InterPro:   IPR000030 [H]

Pfam domain/function: PF01469 Pentapeptide_2; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 58666; Mature: 58535

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRFRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQGAAAAAM
CCCCEEEEEECCCCCEEEEHHHHCCHHHHHHCCHHHHCHHECCCCCCCCCCCCHHHHHHH
VVAAAPYAGWLAAAAARAGGAAVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQLVLSNV
HHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
FGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALAPWQQAVPGLLGLLDSAQSS
HCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQAVTAQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NLGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDT
ECCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC
SGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAG
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
AGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
NINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNS
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVS
CEEECCCCEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCEECCCCCCCEEEE
GNGLSGFFKNLFG
CCCHHHHHHHHCC
>Mature Secondary Structure 
PGRFRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQGAAAAAM
CCCEEEEEECCCCCEEEEHHHHCCHHHHHHCCHHHHCHHECCCCCCCCCCCCHHHHHHH
VVAAAPYAGWLAAAAARAGGAAVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQLVLSNV
HHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
FGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALAPWQQAVPGLLGLLDSAQSS
HCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQAVTAQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NLGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDT
ECCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC
SGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAG
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
AGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
NINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNS
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVS
CEEECCCCEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCEECCCCCCCEEEE
GNGLSGFFKNLFG
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]