Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

Click here to switch to the map view.

The map label for this gene is lppP [H]

Identifier: 148823530

GI number: 148823530

Start: 2614483

End: 2615019

Strand: Reverse

Name: lppP [H]

Synonym: TBFG_12353

Alternate gene names: 148823530

Gene position: 2615019-2614483 (Counterclockwise)

Preceding gene: 148823534

Following gene: 148823529

Centisome position: 59.1

GC content: 62.2

Gene sequence:

>537_bases
GTGCGTCGTCAGCGTAGCGCCGTCCCGATTCTGGCACTGTTGGCACTGTTGGCACTGTTGGCACTGTTGGCACTGATTGT
GGGGCTGGGCGCCTCCGGTTGCGCCTGGAAGCCGCCGACAACACGACCGTCACCACCGAACACCTGCAAGGATTCCGACG
GGCCGACCGCTGACACGGTACGGCAGGCCATCGCTGCGGTCCCGATCGTGGTACCGGGCTCCAAATGGGTCGAAATCACC
CGAGGACATACCCGCAACTGCCGCTTGCATTGGGTGCAAATCATCCCGACAATTGCCTCCCAGTCGACTCCCCAACAGCT
GTTGTTCTTCGACCGCAACATCCCGCTGGGCTCGCCGACTCGGAATCCGAAGCCCTACATCACCGTATTGCCTGCAGGCG
ATGACACCGTGACGGTTCAGTACCAATGGCAGATCGGCAGCGACCAGGAGTGCTGTCCCACCGGCATCGGCACGGTGCGA
TTCCACATCGGATCAGATGGCAAGCTCGAGGCGCTCGGCTCGATCCCCCATCAGTAG

Upstream 100 bases:

>100_bases
ATTTGGGGCAAGAATACCGGCGGCACCCGCGCTTTAGGATCGACACCTGAGGCGTTGATGAAACGTAGGGGAAATTCCCA
GTTTTCGCTAAGCTCGTGAC

Downstream 100 bases:

>100_bases
TACTCGAGCACAATAGCTTTCGCTGTTTTCTTGCTGCGAGGACAACAGCGCAGCTTTACATGTAGGGTTTAGGTCTTCTC
GGCTCAAGGGCGAGCCCAAT

Product: lipoprotein lppP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRRQRSAVPILALLALLALLALLALIVGLGASGCAWKPPTTRPSPPNTCKDSDGPTADTVRQAIAAVPIVVPGSKWVEIT
RGHTRNCRLHWVQIIPTIASQSTPQQLLFFDRNIPLGSPTRNPKPYITVLPAGDDTVTVQYQWQIGSDQECCPTGIGTVR
FHIGSDGKLEALGSIPHQ

Sequences:

>Translated_178_residues
MRRQRSAVPILALLALLALLALLALIVGLGASGCAWKPPTTRPSPPNTCKDSDGPTADTVRQAIAAVPIVVPGSKWVEIT
RGHTRNCRLHWVQIIPTIASQSTPQQLLFFDRNIPLGSPTRNPKPYITVLPAGDDTVTVQYQWQIGSDQECCPTGIGTVR
FHIGSDGKLEALGSIPHQ
>Mature_178_residues
MRRQRSAVPILALLALLALLALLALIVGLGASGCAWKPPTTRPSPPNTCKDSDGPTADTVRQAIAAVPIVVPGSKWVEIT
RGHTRNCRLHWVQIIPTIASQSTPQQLLFFDRNIPLGSPTRNPKPYITVLPAGDDTVTVQYQWQIGSDQECCPTGIGTVR
FHIGSDGKLEALGSIPHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19157; Mature: 19157

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQRSAVPILALLALLALLALLALIVGLGASGCAWKPPTTRPSPPNTCKDSDGPTADTV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RQAIAAVPIVVPGSKWVEITRGHTRNCRLHWVQIIPTIASQSTPQQLLFFDRNIPLGSPT
HHHHHHCCEEECCCCEEEEECCCCCCCEEEEEEEEEHHCCCCCCCEEEEEECCCCCCCCC
RNPKPYITVLPAGDDTVTVQYQWQIGSDQECCPTGIGTVRFHIGSDGKLEALGSIPHQ
CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MRRQRSAVPILALLALLALLALLALIVGLGASGCAWKPPTTRPSPPNTCKDSDGPTADTV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RQAIAAVPIVVPGSKWVEITRGHTRNCRLHWVQIIPTIASQSTPQQLLFFDRNIPLGSPT
HHHHHHCCEEECCCCEEEEECCCCCCCEEEEEEEEEHHCCCCCCCEEEEEECCCCCCCCC
RNPKPYITVLPAGDDTVTVQYQWQIGSDQECCPTGIGTVRFHIGSDGKLEALGSIPHQ
CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]