| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is yqjI [H]
Identifier: 148823055
GI number: 148823055
Start: 2101927
End: 2103378
Strand: Reverse
Name: yqjI [H]
Synonym: TBFG_11872
Alternate gene names: 148823055
Gene position: 2103378-2101927 (Counterclockwise)
Preceding gene: 148823056
Following gene: 148823054
Centisome position: 47.54
GC content: 65.22
Gene sequence:
>1452_bases ATGAGTTCGTCGGAATCGCCAGCCGGCATCGCGCAGATCGGCGTCACTGGCCTGGCCGTGATGGGTTCCAACATCGCCCG AAACTTCGCCCGGCACGGCTACACCGTGGCAGTGCACAATCGGTCGGTCGCCAAGACCGACGCGCTGCTTAAGGAGCACA GCTCAGACGGCAAGTTCGTGCGCAGTGAAACGATCCCCGAATTTCTTGCCGCACTGGAAAAACCGCGTCGGGTGCTGATC ATGGTCAAGGCCGGAGAGGCCACTGACGCTGTCATCAACGAACTTGCTGACGCCATGGAACCCGGCGACATCATCATCGA CGGCGGCAATGCGTTGTACACCGACACCATGCGCCGCGAGAAAGCGATGCGTGAGCGGGGCTTGCACTTCGTCGGGGCCG GGATCTCCGGCGGCGAAGAGGGCGCGTTGAACGGGCCGTCGATCATGCCCGGCGGACCCGCCGAGTCATACCAATCGCTG GGTCCGCTGCTCGAGGAGATCTCCGCGCATGTCGACGGCGTGCCGTGCTGCACCCACATTGGCCCGGACGGCTCCGGGCA CTTCGTCAAGATGGTCCACAACGGCATCGAGTACTCCGACATGCAGCTCATCGGTGAGGCCTACCAGCTGATGCGCGACG GGCTAGGTCTGACCGCGCCGGCGATCGCCGATGTGTTCACCGAGTGGAACAATGGCGATCTGGACAGCTACCTGGTCGAG ATCACCGCCGAGGTGCTGCGGCAGACCGATGCCAAGACCGGCAAACCGCTCGTCGACGTCATCGTGGACCGGGCCGAGCA GAAAGGCACCGGCCGTTGGACCGTCAAGTCCGCGCTGGACCTGGGTGTGCCGGTGACCGGCATCGCCGAAGCGGTGTTTG CCCGCGCTCTCTCGGGATCCGTGGGGCAACGCTCGGCCGCCAGCGGTCTGGCTTCGGGCAAGCTCGGCGAGCAGCCCGCC GACCCCGCCACGTTCACCGAAGACGTCCGCCAGGCGTTGTACGCCTCCAAGATCGTGGCCTACGCTCAGGGCTTCAACCA GATCCAGGCCGGCAGCGCCGAATTCGGCTGGGACATCACGCCGGGCGACCTGGCCACCATCTGGCGTGGCGGCTGCATCA TCCGGGCGAAGTTCCTCAACCACATCAAGGAAGCCTTTGACGCCAGCCCGAACCTGGCCAGTCTGATTGTGGCCCCGTAT TTCCGCGGCGCCGTCGAATCGGCGATCGACAGTTGGCGGCGTGTGGTGTCGACGGCGGCCCAACTGGGTATCCCGACCCC GGGATTCTCGTCGGCCCTGTCGTATTACGACGCGCTGCGCACCGCGCGGCTGCCCGCTGCACTCACCCAGGCCCAGCGCG ACTTCTTCGGCGCACACACCTACGGCCGGATCGACGAACCAGGCAAGTTCCACACACTATGGAGTTCAGACCGCACCGAA GTACCGGTGTAG
Upstream 100 bases:
>100_bases TCCTGGTGGTGCCCACCGTCGCGCTGGCCGTACCGTGGCTCACGCAGCTGCAGCGGCTGTTCATCGCCTAGCGAAGCCGG GCCCAACTGAAAGGCAGGAC
Downstream 100 bases:
>100_bases CGGGCTAGAACTAAAAGGGGGTAAAGGGGTAAGTGATGAGATTTCTAGACGGGCACCCACCCGGGTACGACCTGACATAC AACGACGTGTTCATCGTTCC
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFVRSETIPEFLAALEKPRRVLI MVKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRREKAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSL GPLLEEISAHVDGVPCCTHIGPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVE ITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVGQRSAASGLASGKLGEQPA DPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDITPGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPY FRGAVESAIDSWRRVVSTAAQLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTE VPV
Sequences:
>Translated_483_residues MSSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFVRSETIPEFLAALEKPRRVLI MVKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRREKAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSL GPLLEEISAHVDGVPCCTHIGPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVE ITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVGQRSAASGLASGKLGEQPA DPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDITPGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPY FRGAVESAIDSWRRVVSTAAQLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTE VPV >Mature_482_residues SSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFVRSETIPEFLAALEKPRRVLIM VKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRREKAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSLG PLLEEISAHVDGVPCCTHIGPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVEI TAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVGQRSAASGLASGKLGEQPAD PATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDITPGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPYF RGAVESAIDSWRRVVSTAAQLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTEV PV
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=468, Percent_Identity=51.0683760683761, Blast_Score=463, Evalue=1e-130, Organism=Escherichia coli, GI1788341, Length=464, Percent_Identity=53.8793103448276, Blast_Score=518, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17542558, Length=473, Percent_Identity=47.3572938689218, Blast_Score=448, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321695, Length=464, Percent_Identity=48.0603448275862, Blast_Score=455, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6321977, Length=460, Percent_Identity=49.7826086956522, Blast_Score=445, Evalue=1e-126, Organism=Drosophila melanogaster, GI24639279, Length=470, Percent_Identity=47.8723404255319, Blast_Score=435, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 51361; Mature: 51230
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEE RSETIPEFLAALEKPRRVLIMVKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRRE HHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHH KAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSLGPLLEEISAHVDGVPCCTHI HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCC GPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVE CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH ITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGS HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCC VGQRSAASGLASGKLGEQPADPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDIT CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC PGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPYFRGAVESAIDSWRRVVSTAA CCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC VPV CCC >Mature Secondary Structure SSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEE RSETIPEFLAALEKPRRVLIMVKAGEATDAVINELADAMEPGDIIIDGGNALYTDTMRRE HHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHH KAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSLGPLLEEISAHVDGVPCCTHI HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCC GPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVE CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH ITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGS HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCC VGQRSAASGLASGKLGEQPADPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDIT CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC PGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPYFRGAVESAIDSWRRVVSTAA CCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC VPV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]