Click here to switch to the map view.

The map label for this gene is 148822543

Identifier: 148822543

GI number: 148822543

Start: 1491078

End: 1491758

Strand: Direct

Name: 148822543

Synonym: TBFG_11352

Alternate gene names: NA

Gene position: 1491078-1491758 (Clockwise)

Preceding gene: 148822539

Following gene: 148822544

Centisome position: 33.7

GC content: 64.46

Gene sequence:

>681_bases
GTGAGTCGGGTGCGTCTAGTCATCGCCCAGTGCACTGTCGACTACATCGGCCGGCTCACCGCGCATCTGCCGTCCGCGCG
CCGGCTGTTGCTGTTCAAGGCCGACGGATCGGTCAGCGTACATGCTGACGACCGCGCCTACAAGCCGTTGAACTGGATGA
GTCCGCCGTGCTGGTTGACCGAAGAGTCCGGCGGCCAGGCGCCAGTGTGGGTGGTCGAGAACAAGGCCGGCGAGCAGCTG
CGCATCACTATCGAAGGAATCGAGCACGACAGTAGCCACGAGCTGGGCGTGGACCCCGGGCTGGTCAAGGACGGCGTCGA
GGCCCACTTGCAGGCGTTGCTCGCCGAGCACATCCAATTGCTGGGCGAAGGGTACACGCTGGTCCGCCGCGAGTACATGA
CCGCGATCGGACCCGTCGACCTGCTGTGCCGCGACGAACGAGGTGGCTCGGTCGCGGTGGAAATCAAGCGGCGTGGCGAG
ATCGACGGCGTGGAGCAGCTGACCCGCTACCTCGAGTTGCTCAACCGCGACAGTGTGCTCGCGCCGGTCAAGGGGGTGTT
TGCCGCTCAACAGATCAAGCCGCAGGCTCGGATTCTGGCCACCGACCGCGGGATCCGTTGTTTGACATTGGATTACGACA
CAATGCGCGGGATGGATAGCGGCGAGTACCGGCTGTTCTGA

Upstream 100 bases:

>100_bases
CCCTGGCAAGTGTCGAGTGGTGGCCTTCTCGGATGGCATGGTGACGTCAGCGTAGTGTGTCGGTCACGCTCTAAGGAACA
ACGTCGTTGCGCGCTCTAAG

Downstream 100 bases:

>100_bases
GTTGCGCGATTAAACTGATGCGATGGCTCGGCGCCGCAAACCGCTGCACCGGCAGCGGCCGGAACCGCCGTCGTGGGCCC
TGCGCCGAGTGGAAGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQL
RITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE
IDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF

Sequences:

>Translated_226_residues
MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQL
RITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE
IDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF
>Mature_225_residues
SRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQLR
ITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEI
DGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002793 [H]

Pfam domain/function: PF01939 DUF91 [H]

EC number: NA

Molecular weight: Translated: 25163; Mature: 25032

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLT
CCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEE
EESGGQAPVWVVENKAGEQLRITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL
HCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
APVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF
HHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEECC
>Mature Secondary Structure 
SRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLT
CCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEE
EESGGQAPVWVVENKAGEQLRITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL
HCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
APVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF
HHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]