| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is yhhW [C]
Identifier: 148821373
GI number: 148821373
Start: 212593
End: 213327
Strand: Reverse
Name: yhhW [C]
Synonym: TBFG_10182
Alternate gene names: 148821373
Gene position: 213327-212593 (Counterclockwise)
Preceding gene: 148821375
Following gene: 148821372
Centisome position: 4.82
GC content: 62.99
Gene sequence:
>735_bases ATGACCGCCACCGTCGAGATAAGGCGTGCGGCCGACCGGGCGGTCACCACGACGTCCTGGCTGAAATCCCGGCATTCGTT CTCATTCGGCGACCACTACGATCCCGACAACACCCACCACGGGCTCCTGTTGGTGAACAACGACGACCAAATGGAACCGG CTTCGGGTTTTGATCCCCATCCACACCGTGACATGGAAATCGTGACCTGGGTGCTGCGGGGAGCGCTCAGACACCAGGAT TCCGCCGGCAATAGCGGAGTGATCTATCCCGGTCTGGCCCAACGCATGTCGGCCGGCACCGGAATCTTGCATTCGGAAAT GAACGATTCTGCTACCGAGCCGGTGCATTTCGTGCAGATGTGGGTAATACCCGATGCAACCGGCATCACTGCCAGCTACC AACAGCAGGAGATAGACGACGAACTGTTGCGCGCCGGCCTGGTAACCATCGCGTCGGGCATACCCGGGCAAGACGCAGCG CTCACCCTGCATAACAGCAGCGCCTCGTTGCACGGCGCGCGGCTGCGGCCCGGCGCTACGGTCAGCCTGCCCTGCGCACC CTTCCTGCATCTGTTCGTCGCCTACGGCCGCCTCACTCTGGAAGGTGGCGGCGAGCTTGCCGACGGGGACGCGGTGCGGT TCACCGACGCTGACGCCCACGGCCTGACCGCCAATGAGCCGTCGGAAGTACTGATCTGGGAGATGCACGCGAAGCTGGGC GATTCGGCAACATAG
Upstream 100 bases:
>100_bases ATGGCCGCCGACCGCGTGTCACACGTGGTGGCCTTCCTCGACACCACCTTGTTCCCGAAATTCGGCCTGCCCGATTCGCT GTGATGGCGAACGTGACGTC
Downstream 100 bases:
>100_bases AGTGGCCACGACAGACAGGAGCCCGCATGTCTCAAGCGCAGCCGCGCCCCGCCGCACCCAACCCCAAGCGGAACGTCAAA GCGATTCGGACGGTGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein Rv0181c/MT0190 [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQD SAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAA LTLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADAHGLTANEPSEVLIWEMHAKLG DSAT
Sequences:
>Translated_244_residues MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQD SAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAA LTLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADAHGLTANEPSEVLIWEMHAKLG DSAT >Mature_243_residues TATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDS AGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAAL TLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADAHGLTANEPSEVLIWEMHAKLGD SAT
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=87, Percent_Identity=41.3793103448276, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4505823, Length=87, Percent_Identity=41.3793103448276, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1789847, Length=232, Percent_Identity=35.3448275862069, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1789493, Length=103, Percent_Identity=32.0388349514563, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 26267; Mature: 26136
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPH CCCEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQM CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCEEECCCCCCCCCCEEEEEE WVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGARLRPGAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEECCCCE VSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADAHGLTANEPSEVLIWEMHAKLG EECCHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC DSAT CCCC >Mature Secondary Structure TATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPH CCEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQM CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCEEECCCCCCCCCCEEEEEE WVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGARLRPGAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEECCCCE VSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADAHGLTANEPSEVLIWEMHAKLG EECCHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC DSAT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]