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The map label for this gene is ltp2

Identifier: 148663403

GI number: 148663403

Start: 3988165

End: 3989325

Strand: Reverse

Name: ltp2

Synonym: MRA_3579

Alternate gene names: NA

Gene position: 3989325-3988165 (Counterclockwise)

Preceding gene: 148663404

Following gene: 148663399

Centisome position: 90.26

GC content: 65.89

Gene sequence:

>1161_bases
GTGTTATCGGGTCAGGCGGCCATCGTCGGTATCGGCGCCACCGACTTTTCGAAGAACTCCGGTCGAAGTGAGCTGCGGCT
GGCGGCCGAGGCGGTGTTGGATGCGTTGGCCGATGCGGGCCTGAGCCCGACCGATGTCGACGGGCTGACCACGTTCACGA
TGGACACCAACACCGAAATCGCCGTGGCGCGTGCGGCCGGCATCGGCGAGCTGACGTTCTTCTCCAAGATCCACTACGGC
GGTGGCGCCGCATGTGCGACCGTGCAGCACGCCGCTATGGCAGTGGCCACCGGGGTGGCTGACGTCGTGGTGGCGTATCG
GGCATTCAACGAACGATCCGGCATGCGGTTCGGTCAGGTGCAAACTCGTTTGACCGAGAATGCCGACTCCACCGGCGTGG
ACAATTCGTTTTCGTATCCGCACGGGCTCTCCACGCCCGCCGCGCAAGTGGCGATGATCGCTCGCCGGTACATGCACCTG
TCTGGTGCGACCAGCCGGGACTTCGGTGCTGTCTCGGTGGCCGACCGCAAGCATGCCGCCAACAACCCCAAGGCGTACTT
CTACGGCAAGCCGATAACCATTGAGGACCACCAGAATTCGAGGTGGATCGCCGAGCCGCTGCGGCTGCTGGACTGCTGCC
AGGAGACCGACGGCGCGGTCGCGATCGTGGTGACGTCAGCTGCGCGCGCACGGGACCTCAAGCAGCGCCCGGTGGTCATT
GAGGCGGCTGCGCAGGGCTGCAGTCCAGACCAGTACACGATGGTCAGCTACTACCGGCCGGAACTCGACGGCCTGCCCGA
GATGGGCCTGGTGGGCCGGCAGCTATGGGCGCAGTCGGGGCTGACGCCGGCCGATGTCCAGACCGCAGTCCTCTACGACC
ACTTCACGCCGTTTACCCTGATTCAGTTGGAGGAGTTGGGATTCTGCGGCAAGGGCGAAGCGAAAGACTTCATCGCCGAC
GGCGCGATCGAGGTGGGCGGGCGGCTGCCCATCAACACCCACGGCGGTCAACTCGGCGAAGCCTACATCCATGGCATGAA
CGGCATCGCGGAGGGGGTGCGGCAGCTGCGCGGCACCTCGGTGAACCCGGTGGCGGGCGTCGAGCATGTGCTCGTCACCG
CGGGCACCGGGGTGCCTACGTCCGGGCTGATCCTGGGTTAA

Upstream 100 bases:

>100_bases
CCGCGGTGAACGACGGCTTGATCACGGTAAAGGTGGTGGGCCGCAATACCCTTGGCGACCACGTGACCGCGACGGTGGAA
CTTTCGATGAGGGATTCGTA

Downstream 100 bases:

>100_bases
CTACCACACCAGGTTGCCGTGGCTGAAATAAGGGCCGGCGGTGGGGGCGTACTGTGAGTAGCCCGCGTCGACGAGCGGCT
TCAGCACGTTGTTCAGCCCG

Product: lipid-transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLSGQAAIVGIGATDFSKNSGRSELRLAAEAVLDALADAGLSPTDVDGLTTFTMDTNTEIAVARAAGIGELTFFSKIHYG
GGAACATVQHAAMAVATGVADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHL
SGATSRDFGAVSVADRKHAANNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRPVVI
EAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQSGLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIAD
GAIEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLVTAGTGVPTSGLILG

Sequences:

>Translated_386_residues
MLSGQAAIVGIGATDFSKNSGRSELRLAAEAVLDALADAGLSPTDVDGLTTFTMDTNTEIAVARAAGIGELTFFSKIHYG
GGAACATVQHAAMAVATGVADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHL
SGATSRDFGAVSVADRKHAANNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRPVVI
EAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQSGLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIAD
GAIEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLVTAGTGVPTSGLILG
>Mature_386_residues
MLSGQAAIVGIGATDFSKNSGRSELRLAAEAVLDALADAGLSPTDVDGLTTFTMDTNTEIAVARAAGIGELTFFSKIHYG
GGAACATVQHAAMAVATGVADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHL
SGATSRDFGAVSVADRKHAANNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRPVVI
EAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQSGLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIAD
GAIEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLVTAGTGVPTSGLILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=370, Percent_Identity=25.4054054054054, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI302344762, Length=286, Percent_Identity=25.5244755244755, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI302344767, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI302344760, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI55956775, Length=273, Percent_Identity=24.9084249084249, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17537653, Length=369, Percent_Identity=26.5582655826558, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19921506, Length=379, Percent_Identity=26.9129287598945, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24585051, Length=372, Percent_Identity=27.4193548387097, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 40588; Mature: 40588

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGQAAIVGIGATDFSKNSGRSELRLAAEAVLDALADAGLSPTDVDGLTTFTMDTNTEI
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE
AVARAAGIGELTFFSKIHYGGGAACATVQHAAMAVATGVADVVVAYRAFNERSGMRFGQV
EEEECCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QTRLTENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAA
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHCC
NNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRPVVI
CCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCEEE
EAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQSGLTPADVQTAVLYDHFTPFTL
EEHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCEEE
IQLEELGFCGKGEAKDFIADGAIEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTS
EEEHHCCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCC
VNPVAGVEHVLVTAGTGVPTSGLILG
CCCCCCCEEEEEEECCCCCCCCCEEC
>Mature Secondary Structure
MLSGQAAIVGIGATDFSKNSGRSELRLAAEAVLDALADAGLSPTDVDGLTTFTMDTNTEI
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE
AVARAAGIGELTFFSKIHYGGGAACATVQHAAMAVATGVADVVVAYRAFNERSGMRFGQV
EEEECCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QTRLTENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAA
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHCC
NNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRPVVI
CCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCEEE
EAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQSGLTPADVQTAVLYDHFTPFTL
EEHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCEEE
IQLEELGFCGKGEAKDFIADGAIEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTS
EEEHHCCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCC
VNPVAGVEHVLVTAGTGVPTSGLILG
CCCCCCCEEEEEEECCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]