| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is mhpD [H]
Identifier: 148663399
GI number: 148663399
Start: 3983177
End: 3983962
Strand: Reverse
Name: mhpD [H]
Synonym: MRA_3575
Alternate gene names: 148663399
Gene position: 3983962-3983177 (Counterclockwise)
Preceding gene: 148663403
Following gene: 148663398
Centisome position: 90.14
GC content: 66.41
Gene sequence:
>786_bases ATGCTCCGTGATGCCACCCGTGATGAGCTGGCCGCCGACCTAGCACAAGCCGAGCGAAGCCGCGACCCGATCGGTCAACT GACCGCCGCCCATCCCGAGATCGATGTCGTCGACGCCTACGAGATCCAGTTGATCAACATCCGGCAGCGGGTGGCCGAGG GTGCCCGCGTGGTGGGTCATAAGGTCGGGCTGTCGTCGCCGATCATGCAGCAGATGATGGGGGTTGACGAACCAGACTAC GGACACCTGCTCGACGACATGCAGGTGTTCGAAGACACGCCGGTCCAGGCGTCCCGGTACCTGTCTCCGCGGGTTGAGGT GGAGGTGGGCTTCATCCTGGCCGCCGACCTACCGGGTGCGGGCTGCACCGAGGACGACGTGCTGGCGGCCACCGAGGCCC TGGTGCCCGCCATCGAGCTGATCGACACCAGGATCAAGGATTGGCAGATCAAGATCTGCGACACCATCGCCGACAACGCC TCGGCGGCGGGCTTCGTGTTGGGCGCGGCCCGGGTGCCGCCGGCCGATCTTGACGTCAGGGCGATCGATGCGAAGCTGAC CCGCAACGGCGAGGTGGTGGCCGAGGGCCGCAGTGATGCGGTGTTGGGTAACCCGGCGACCGCGGTGGCTTGGCTGGCCG GCAAGGTCGAGAGTTTCGGCGTGCGGCTGCGCAAAGGCGACATCGTGTTACCCGGGTCATGCACGTTCGCGGTCGAGGCG CGGGCCGGCGACGAGTTTGTCGCCGACTTCACCGGGCTGGGTTTGGTCCGGTTGTCGTTCGAATAA
Upstream 100 bases:
>100_bases CCACGACGTCGAACTCCTGCACAGTCATGTAGAACACGTTATAGAATTGCTCGGGTCGGGCGCTACTGGCCCGGTCACGC CTACGAGGGGACTTCGCCGA
Downstream 100 bases:
>100_bases GGGGAGCAACATGCCGTCCAAGGCAAAAGTGGCGATTGTCGGGTCGGGAAATATCAGCACCGATCTGCTGTACAAGCTGC TGCGATCGGAGTGGCTGGAG
Product: 2-keto-4-pentenoate hydratase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 3 [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLRDATRDELAADLAQAERSRDPIGQLTAAHPEIDVVDAYEIQLINIRQRVAEGARVVGHKVGLSSPIMQQMMGVDEPDY GHLLDDMQVFEDTPVQASRYLSPRVEVEVGFILAADLPGAGCTEDDVLAATEALVPAIELIDTRIKDWQIKICDTIADNA SAAGFVLGAARVPPADLDVRAIDAKLTRNGEVVAEGRSDAVLGNPATAVAWLAGKVESFGVRLRKGDIVLPGSCTFAVEA RAGDEFVADFTGLGLVRLSFE
Sequences:
>Translated_261_residues MLRDATRDELAADLAQAERSRDPIGQLTAAHPEIDVVDAYEIQLINIRQRVAEGARVVGHKVGLSSPIMQQMMGVDEPDY GHLLDDMQVFEDTPVQASRYLSPRVEVEVGFILAADLPGAGCTEDDVLAATEALVPAIELIDTRIKDWQIKICDTIADNA SAAGFVLGAARVPPADLDVRAIDAKLTRNGEVVAEGRSDAVLGNPATAVAWLAGKVESFGVRLRKGDIVLPGSCTFAVEA RAGDEFVADFTGLGLVRLSFE >Mature_261_residues MLRDATRDELAADLAQAERSRDPIGQLTAAHPEIDVVDAYEIQLINIRQRVAEGARVVGHKVGLSSPIMQQMMGVDEPDY GHLLDDMQVFEDTPVQASRYLSPRVEVEVGFILAADLPGAGCTEDDVLAATEALVPAIELIDTRIKDWQIKICDTIADNA SAAGFVLGAARVPPADLDVRAIDAKLTRNGEVVAEGRSDAVLGNPATAVAWLAGKVESFGVRLRKGDIVLPGSCTFAVEA RAGDEFVADFTGLGLVRLSFE
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=255, Percent_Identity=42.7450980392157, Blast_Score=200, Evalue=6e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 27892; Mature: 27892
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDATRDELAADLAQAERSRDPIGQLTAAHPEIDVVDAYEIQLINIRQRVAEGARVVGH CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHH KVGLSSPIMQQMMGVDEPDYGHLLDDMQVFEDTPVQASRYLSPRVEVEVGFILAADLPGA HCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCCCC GCTEDDVLAATEALVPAIELIDTRIKDWQIKICDTIADNASAAGFVLGAARVPPADLDVR CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEE AIDAKLTRNGEVVAEGRSDAVLGNPATAVAWLAGKVESFGVRLRKGDIVLPGSCTFAVEA EEEEEECCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHCEEEECCCEEECCCCEEEEEE RAGDEFVADFTGLGLVRLSFE CCCCHHHHHHCCCEEEEEECC >Mature Secondary Structure MLRDATRDELAADLAQAERSRDPIGQLTAAHPEIDVVDAYEIQLINIRQRVAEGARVVGH CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHH KVGLSSPIMQQMMGVDEPDYGHLLDDMQVFEDTPVQASRYLSPRVEVEVGFILAADLPGA HCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCCCC GCTEDDVLAATEALVPAIELIDTRIKDWQIKICDTIADNASAAGFVLGAARVPPADLDVR CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEE AIDAKLTRNGEVVAEGRSDAVLGNPATAVAWLAGKVESFGVRLRKGDIVLPGSCTFAVEA EEEEEECCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHCEEEECCCEEECCCCEEEEEE RAGDEFVADFTGLGLVRLSFE CCCCHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791097; 12823813 [H]