| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ccp [H]
Identifier: 148654175
GI number: 148654175
Start: 2963620
End: 2964774
Strand: Direct
Name: ccp [H]
Synonym: PsycPRwf_2378
Alternate gene names: 148654175
Gene position: 2963620-2964774 (Clockwise)
Preceding gene: 148654171
Following gene: 148654177
Centisome position: 99.48
GC content: 46.15
Gene sequence:
>1155_bases ATGGCTAACGCTCATCAAAATAACCCGAGAAAGGAAGTCACTTATGCTCTTGTCGGCGTGATTGGTTTCTTACTACTTGT CTTGTTAATCGCCCTTTCTGGATATTTTCGTCCAGGCGGTCAACACGTCGTATCTAATGAATCAGAAGATACGCAAGACA CAGAGCTAGGCGCTGAGAGCGCCAGTAATACTGATGTAAAGCCACTTATCAGCGTTCGTGATGAGCCTGTCGAAACCATT ACAGTAGAGGCGATTGAATCGCCCAAAAAAGTAGAGCTGGGTAAAATGCTGTGGTTTGATACCCGCTTATCAAAATCAGG AACCTTGTCTTGTAATAGCTGTCATGATCTTGCCAAAGGCGGTACAGACAACATCCCAACCTCAGTGGGTCATAACTGGG CCGAAGGGCCAATCAACTCGCCGACAGTGTTAAACAGTCGCTACTTCTTGGCACAGTTCTGGGATGGACGCGCCAAAGAT TTGATGGATCAGGCCGGTGGTCCAATTGAAAATCCAATAGAGATGGCATCGTCTCATGAGTATGTTGAACAGGTTTTAAA CTCAATCCCAGAGTACAAAGCCTTGTTTAATGAAGCTTATGGCAGCAGTGGTGATGTCACCATCGATCAGGTAACCGAGG CAATTGCCTTATTTGAGGATACCCTTGTGACACCGAATTCACGCTTTGACCAATGGCTTGCCGGCGACGATAGTGCCATC AATAAGCAAGAGCTAAACGGCTACAAGCTATTTAAAGACAGTGGCTGTATCGCTTGTCACAATGGTGCGACATTAGGCGG CAGCTCGTTCCAGAAGTTTGGGGTCTTTGAGAAGTACACCACACAAAACCTATCTGAAGGACGCTACGCCGTTACTGGAA AGGAAGAAGACAGACACGTCTTTAAAGTACCGACACTGCGTAACATTGAGCTCACCTATCCATACTTCCATGATGGCCAA GTAGACTCATTGGCAGAAGCGGTCAATATTATGGGTAAAATTCAGTTAAACCGTACCTATGAACCTCAAGAGACCGAAGA CATTGTGGCATTTTTGAAGACGCTAACTGGTGATCAGCCGCAGATTACCCTACCTAAACTGCCGCCCTCTAACGAGAATA CACCAAAGCCTATTCCGTTTAAAAGACAAGGCTAG
Upstream 100 bases:
>100_bases AATAAACTATTTCACACGTCAATCAATTTAGCCCATTTCAGTCAATACAGCCCACGTTGCTAACTTTCACTTATTCTTAG TCACAACAGGTACACATGCT
Downstream 100 bases:
>100_bases GCTATAAAAGGTAAGAGCCAGAGTAGATTTAGATAAATAAAAAAACCAGCGAATGAGTCGCTGGTTTTTTTATGACAAAT CAGGTCAATTAAATCTTAAT
Product: cytochrome-c peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MANAHQNNPRKEVTYALVGVIGFLLLVLLIALSGYFRPGGQHVVSNESEDTQDTELGAESASNTDVKPLISVRDEPVETI TVEAIESPKKVELGKMLWFDTRLSKSGTLSCNSCHDLAKGGTDNIPTSVGHNWAEGPINSPTVLNSRYFLAQFWDGRAKD LMDQAGGPIENPIEMASSHEYVEQVLNSIPEYKALFNEAYGSSGDVTIDQVTEAIALFEDTLVTPNSRFDQWLAGDDSAI NKQELNGYKLFKDSGCIACHNGATLGGSSFQKFGVFEKYTTQNLSEGRYAVTGKEEDRHVFKVPTLRNIELTYPYFHDGQ VDSLAEAVNIMGKIQLNRTYEPQETEDIVAFLKTLTGDQPQITLPKLPPSNENTPKPIPFKRQG
Sequences:
>Translated_384_residues MANAHQNNPRKEVTYALVGVIGFLLLVLLIALSGYFRPGGQHVVSNESEDTQDTELGAESASNTDVKPLISVRDEPVETI TVEAIESPKKVELGKMLWFDTRLSKSGTLSCNSCHDLAKGGTDNIPTSVGHNWAEGPINSPTVLNSRYFLAQFWDGRAKD LMDQAGGPIENPIEMASSHEYVEQVLNSIPEYKALFNEAYGSSGDVTIDQVTEAIALFEDTLVTPNSRFDQWLAGDDSAI NKQELNGYKLFKDSGCIACHNGATLGGSSFQKFGVFEKYTTQNLSEGRYAVTGKEEDRHVFKVPTLRNIELTYPYFHDGQ VDSLAEAVNIMGKIQLNRTYEPQETEDIVAFLKTLTGDQPQITLPKLPPSNENTPKPIPFKRQG >Mature_383_residues ANAHQNNPRKEVTYALVGVIGFLLLVLLIALSGYFRPGGQHVVSNESEDTQDTELGAESASNTDVKPLISVRDEPVETIT VEAIESPKKVELGKMLWFDTRLSKSGTLSCNSCHDLAKGGTDNIPTSVGHNWAEGPINSPTVLNSRYFLAQFWDGRAKDL MDQAGGPIENPIEMASSHEYVEQVLNSIPEYKALFNEAYGSSGDVTIDQVTEAIALFEDTLVTPNSRFDQWLAGDDSAIN KQELNGYKLFKDSGCIACHNGATLGGSSFQKFGVFEKYTTQNLSEGRYAVTGKEEDRHVFKVPTLRNIELTYPYFHDGQV DSLAEAVNIMGKIQLNRTYEPQETEDIVAFLKTLTGDQPQITLPKLPPSNENTPKPIPFKRQG
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=306, Percent_Identity=45.4248366013072, Blast_Score=247, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 42311; Mature: 42179
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAHQNNPRKEVTYALVGVIGFLLLVLLIALSGYFRPGGQHVVSNESEDTQDTELGAES CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHCCCC ASNTDVKPLISVRDEPVETITVEAIESPKKVELGKMLWFDTRLSKSGTLSCNSCHDLAKG CCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHEEEEEHHCCCCCCCCCHHHHHHHCC GTDNIPTSVGHNWAEGPINSPTVLNSRYFLAQFWDGRAKDLMDQAGGPIENPIEMASSHE CCCCCCHHHCCCCCCCCCCCCEEECCCEEEHHHCCCHHHHHHHHCCCCCCCHHHHHCCHH YVEQVLNSIPEYKALFNEAYGSSGDVTIDQVTEAIALFEDTLVTPNSRFDQWLAGDDSAI HHHHHHHHCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCC NKQELNGYKLFKDSGCIACHNGATLGGSSFQKFGVFEKYTTQNLSEGRYAVTGKEEDRHV CHHHCCCEEEEECCCCEEECCCCCCCCCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCEE FKVPTLRNIELTYPYFHDGQVDSLAEAVNIMGKIQLNRTYEPQETEDIVAFLKTLTGDQP EECCCEECEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCC QITLPKLPPSNENTPKPIPFKRQG EEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANAHQNNPRKEVTYALVGVIGFLLLVLLIALSGYFRPGGQHVVSNESEDTQDTELGAES CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHCCCC ASNTDVKPLISVRDEPVETITVEAIESPKKVELGKMLWFDTRLSKSGTLSCNSCHDLAKG CCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHEEEEEHHCCCCCCCCCHHHHHHHCC GTDNIPTSVGHNWAEGPINSPTVLNSRYFLAQFWDGRAKDLMDQAGGPIENPIEMASSHE CCCCCCHHHCCCCCCCCCCCCEEECCCEEEHHHCCCHHHHHHHHCCCCCCCHHHHHCCHH YVEQVLNSIPEYKALFNEAYGSSGDVTIDQVTEAIALFEDTLVTPNSRFDQWLAGDDSAI HHHHHHHHCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCC NKQELNGYKLFKDSGCIACHNGATLGGSSFQKFGVFEKYTTQNLSEGRYAVTGKEEDRHV CHHHCCCEEEEECCCCEEECCCCCCCCCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCEE FKVPTLRNIELTYPYFHDGQVDSLAEAVNIMGKIQLNRTYEPQETEDIVAFLKTLTGDQP EECCCEECEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCC QITLPKLPPSNENTPKPIPFKRQG EEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]