Click here to switch to the map view.

The map label for this gene is 148654146

Identifier: 148654146

GI number: 148654146

Start: 2925461

End: 2926609

Strand: Direct

Name: 148654146

Synonym: PsycPRwf_2349

Alternate gene names: NA

Gene position: 2925461-2926609 (Clockwise)

Preceding gene: 148654144

Following gene: 148654147

Centisome position: 98.2

GC content: 43.52

Gene sequence:

>1149_bases
ATGAACAAACCCCTCTCTTTTGCCTGTGCAGTAGCTGCACCTATACTATTTAGCCATTCAGCTATGGCTCAATTTGATTA
TTCAAAATACATAGAAACCGATGGTAGCTTCAAGCGCTTCTCAGTTTCAGCAGGTTGGTTGCATGCAAATCCAACCGGTG
ATGCTACGCCAGTTAAAAATACCACTGCGATATCAGATGGCACAAGCCACAACAATGGTAGCGTGAGATCAGGTACCGTA
AAACGGGTGCTAGATCCAGACCAAGGCCTAGACAGTGCTGCTGAAAACCAAGCAAGATTTGATGAAATTAATGGCGGCTT
GAGCCTTCCGGGTGACGACAATACTGACTTATCCAATACCGCTTTAGGTAATTTGTCAGGTACAACTGTGATTAACGGTC
TACAAAAATTTGCGACACCTGGCACAGGTCTTGAATCAGATGATGTAGACACTTTGGGTATGCTACTAAACTATCATATA
GATGATAACTGGTCAGTAGAGGTGAAGGCTGGCTTTCCGCCTAAAGTCGACATCTTAGGTAAAGGTACTGTGGTTGCACC
TTTTAGAGGTGTGGTAACCCCATCAGGTATTGCCGAACAAGCCATTGGTGACTTTAATATTAAAGATGACATTGTGATTA
CCGATTTATCACAAGGCAGCAAAGCCTCTACTGCACGTGCTTGGTTGCCGGCCACAGAGCTACATTATAAGTTTGGTAAA
TCAGGGGTTAATAAATTCCGTCCTTATGTAGGCGCAGGTGTGATGTATGCCTATTTTAACGACTTAAAACTAAATTCAGG
TATTCGTCAAGATTTAGTGGATGCTGGCCATATGATTCAAAACATCAAAGATGGCAATGCCGGTACCTCTTTGCAATACG
ATGGTCCTGACGGTCGAACAACACCTTCTAGTAGTGGCATGCACGTAAAAGTTAAGGCTGATAGTGCTTGGGCACCTATT
GTCACTGTCGGTGCTACCTATGACTTCGATGACAGCTGGTTTGCCGTAGGATCATTGTCTTATGCTAAGTTGGATAGCGA
CAGCACCATCACCGTCTCTAACGATAACGGCGAACAATTAATTAAAGCAGTTTCTAAGATTGATATTGATCCTTATATCA
GCTACTTAGGGGTCGGTTACCGCTTCTAA

Upstream 100 bases:

>100_bases
ATGAGGTGCTAGTAGAGACTAAGCGCTATATAAGTAGCTTCAGCTATTTATTAAATTGGCGGCAAAGCCCACTCCTACAT
TATATTTACAAGGACGTATT

Downstream 100 bases:

>100_bases
TTAAATGGTTGACACTCTATTTAAAAAACGCACTTTTAAAAGGTGCGTTTTTTTATAGTAATAATTTTAAATTGATCGAT
AAACCCATGTGCTGTTTGTT

Product: OmpW family protein

Products: NA

Alternate protein names: Outer Membrane Protein W; Outer Membrane Protein; Outer Membrane Protein OmpW; Outer Membrane Protein OmpW Family; Lipoprotein; OmpW Family Outer Membrane Protein; Outer Membrane Protein OmpW Family Protein; Outer Membrane W Protein; Outer Membrane Protein-OmpW Family; Outer Membrane W Signal Peptide Protein; OmpW Family Outer Membrane Porin; Outer Membrane Protein Ompw Family; OmpW Family Exported Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNKPLSFACAVAAPILFSHSAMAQFDYSKYIETDGSFKRFSVSAGWLHANPTGDATPVKNTTAISDGTSHNNGSVRSGTV
KRVLDPDQGLDSAAENQARFDEINGGLSLPGDDNTDLSNTALGNLSGTTVINGLQKFATPGTGLESDDVDTLGMLLNYHI
DDNWSVEVKAGFPPKVDILGKGTVVAPFRGVVTPSGIAEQAIGDFNIKDDIVITDLSQGSKASTARAWLPATELHYKFGK
SGVNKFRPYVGAGVMYAYFNDLKLNSGIRQDLVDAGHMIQNIKDGNAGTSLQYDGPDGRTTPSSSGMHVKVKADSAWAPI
VTVGATYDFDDSWFAVGSLSYAKLDSDSTITVSNDNGEQLIKAVSKIDIDPYISYLGVGYRF

Sequences:

>Translated_382_residues
MNKPLSFACAVAAPILFSHSAMAQFDYSKYIETDGSFKRFSVSAGWLHANPTGDATPVKNTTAISDGTSHNNGSVRSGTV
KRVLDPDQGLDSAAENQARFDEINGGLSLPGDDNTDLSNTALGNLSGTTVINGLQKFATPGTGLESDDVDTLGMLLNYHI
DDNWSVEVKAGFPPKVDILGKGTVVAPFRGVVTPSGIAEQAIGDFNIKDDIVITDLSQGSKASTARAWLPATELHYKFGK
SGVNKFRPYVGAGVMYAYFNDLKLNSGIRQDLVDAGHMIQNIKDGNAGTSLQYDGPDGRTTPSSSGMHVKVKADSAWAPI
VTVGATYDFDDSWFAVGSLSYAKLDSDSTITVSNDNGEQLIKAVSKIDIDPYISYLGVGYRF
>Mature_382_residues
MNKPLSFACAVAAPILFSHSAMAQFDYSKYIETDGSFKRFSVSAGWLHANPTGDATPVKNTTAISDGTSHNNGSVRSGTV
KRVLDPDQGLDSAAENQARFDEINGGLSLPGDDNTDLSNTALGNLSGTTVINGLQKFATPGTGLESDDVDTLGMLLNYHI
DDNWSVEVKAGFPPKVDILGKGTVVAPFRGVVTPSGIAEQAIGDFNIKDDIVITDLSQGSKASTARAWLPATELHYKFGK
SGVNKFRPYVGAGVMYAYFNDLKLNSGIRQDLVDAGHMIQNIKDGNAGTSLQYDGPDGRTTPSSSGMHVKVKADSAWAPI
VTVGATYDFDDSWFAVGSLSYAKLDSDSTITVSNDNGEQLIKAVSKIDIDPYISYLGVGYRF

Specific function: Unknown

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40646; Mature: 40646

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPLSFACAVAAPILFSHSAMAQFDYSKYIETDGSFKRFSVSAGWLHANPTGDATPVKN
CCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCC
TTAISDGTSHNNGSVRSGTVKRVLDPDQGLDSAAENQARFDEINGGLSLPGDDNTDLSNT
CEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCC
ALGNLSGTTVINGLQKFATPGTGLESDDVDTLGMLLNYHIDDNWSVEVKAGFPPKVDILG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCEEEEEEECCCCCEEEEE
KGTVVAPFRGVVTPSGIAEQAIGDFNIKDDIVITDLSQGSKASTARAWLPATELHYKFGK
CCEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHCC
SGVNKFRPYVGAGVMYAYFNDLKLNSGIRQDLVDAGHMIQNIKDGNAGTSLQYDGPDGRT
CCHHHHCHHHCCCEEEEEEECEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
TPSSSGMHVKVKADSAWAPIVTVGATYDFDDSWFAVGSLSYAKLDSDSTITVSNDNGEQL
CCCCCCCEEEEECCCCCCCEEEECEEECCCCCEEEECCEEEEEECCCCEEEEECCCHHHH
IKAVSKIDIDPYISYLGVGYRF
HHHHHHCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MNKPLSFACAVAAPILFSHSAMAQFDYSKYIETDGSFKRFSVSAGWLHANPTGDATPVKN
CCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCC
TTAISDGTSHNNGSVRSGTVKRVLDPDQGLDSAAENQARFDEINGGLSLPGDDNTDLSNT
CEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCC
ALGNLSGTTVINGLQKFATPGTGLESDDVDTLGMLLNYHIDDNWSVEVKAGFPPKVDILG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCEEEEEEECCCCCEEEEE
KGTVVAPFRGVVTPSGIAEQAIGDFNIKDDIVITDLSQGSKASTARAWLPATELHYKFGK
CCEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHCC
SGVNKFRPYVGAGVMYAYFNDLKLNSGIRQDLVDAGHMIQNIKDGNAGTSLQYDGPDGRT
CCHHHHCHHHCCCEEEEEEECEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
TPSSSGMHVKVKADSAWAPIVTVGATYDFDDSWFAVGSLSYAKLDSDSTITVSNDNGEQL
CCCCCCCEEEEECCCCCCCEEEECEEECCCCCEEEECCEEEEEECCCCEEEEECCCHHHH
IKAVSKIDIDPYISYLGVGYRF
HHHHHHCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA