| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yhhW [C]
Identifier: 148654101
GI number: 148654101
Start: 2871242
End: 2872174
Strand: Direct
Name: yhhW [C]
Synonym: PsycPRwf_2304
Alternate gene names: 148654101
Gene position: 2871242-2872174 (Clockwise)
Preceding gene: 148654100
Following gene: 148654102
Centisome position: 96.38
GC content: 44.59
Gene sequence:
>933_bases ATGAAAACTGAAATTCTTGAACCCCGTATCGCTGATGTCGGTGGTATTCCCATTGCTCGTTTATTACCAAATAAAGGCAA GCGTCCTATTGGTGCTTGGTGCTTCATGGATCATGCTGGTCCTGCCGAATTTGGTGACGATGAAGAGGGTATGCAAGTGG GTCGCCATCCACACATCAACCTACAAACTTTCAGCTGGATGATTGAAGGTGAAGTCCTACACAAAGACAGCATCGGCAAT GAACAATTGATTACCAAAAACCAAGTCAACGTGATGACGGCGGGTACTGGTAACGATCAGGGTATCAGTCACACTGAGCA AAGCGTATTCCCAGAAACGGGCGGCTCTGCTGATGCTTGGCGTGGTATGAACATGGTTCAGCTGTGGATTGCGCTACCGC TTGATCAAAAAATTGAACGTAACTTCCATCACTACCCAGAGCTACCAAGCTGGTCTACTGATACTGCTGACTTTGTACTA ACCACCGGTAGCTACACCACGCCACAAGGTGACAGCTACGAAGCACCGACCATCCAGTACACCAAACTTATTGGTCTAGA TGTGCACATGACTCAAGACGATGACGTTGAGCTGACCTTAGAGCCTGGTTTTGAATACGGTATTTTAATGGTCGTAGATG GTATCGAGTATCAAGGCCAGCAGTACAAACAAAACGAATTAATCCGTTTTGATGACATCTCTGAGACAACAACCATTAAA GTTTCAGGTAAAAAAGGCGCTCGCTTTATGTTGTTAGGCGGTGAGCCATTGAATCAAAAAGTGCTACTGTGGTGGAACTT CGTTGCTGATAACAAAGCAGATATTGAACTGGCCATTAATGATTGGAATAATAATCACCCACGTTTTGGTAACGTAGACT CTGATCTAAAACGATTAGAAGCCCCTGCTTTACCTGAAGGTTTTAAAGAATAA
Upstream 100 bases:
>100_bases GAAGAAACGACAATAAGTGACTACTTTATTATCCCCCAAGCTAGAGCAGCCTTTAGCTGAGTTTTGCTAATTTTTTTATA ACGACAAATCGAGGTCTATT
Downstream 100 bases:
>100_bases TCTCTTTAGAATTATTTAAATAATAGGTCGTACTGTTTAAATAAAATTACAAAAAACTAGTGGCGAATTTTTTTATTTAT TTTATAATTAGCTCCAGTTG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1205 [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKTEILEPRIADVGGIPIARLLPNKGKRPIGAWCFMDHAGPAEFGDDEEGMQVGRHPHINLQTFSWMIEGEVLHKDSIGN EQLITKNQVNVMTAGTGNDQGISHTEQSVFPETGGSADAWRGMNMVQLWIALPLDQKIERNFHHYPELPSWSTDTADFVL TTGSYTTPQGDSYEAPTIQYTKLIGLDVHMTQDDDVELTLEPGFEYGILMVVDGIEYQGQQYKQNELIRFDDISETTTIK VSGKKGARFMLLGGEPLNQKVLLWWNFVADNKADIELAINDWNNNHPRFGNVDSDLKRLEAPALPEGFKE
Sequences:
>Translated_310_residues MKTEILEPRIADVGGIPIARLLPNKGKRPIGAWCFMDHAGPAEFGDDEEGMQVGRHPHINLQTFSWMIEGEVLHKDSIGN EQLITKNQVNVMTAGTGNDQGISHTEQSVFPETGGSADAWRGMNMVQLWIALPLDQKIERNFHHYPELPSWSTDTADFVL TTGSYTTPQGDSYEAPTIQYTKLIGLDVHMTQDDDVELTLEPGFEYGILMVVDGIEYQGQQYKQNELIRFDDISETTTIK VSGKKGARFMLLGGEPLNQKVLLWWNFVADNKADIELAINDWNNNHPRFGNVDSDLKRLEAPALPEGFKE >Mature_310_residues MKTEILEPRIADVGGIPIARLLPNKGKRPIGAWCFMDHAGPAEFGDDEEGMQVGRHPHINLQTFSWMIEGEVLHKDSIGN EQLITKNQVNVMTAGTGNDQGISHTEQSVFPETGGSADAWRGMNMVQLWIALPLDQKIERNFHHYPELPSWSTDTADFVL TTGSYTTPQGDSYEAPTIQYTKLIGLDVHMTQDDDVELTLEPGFEYGILMVVDGIEYQGQQYKQNELIRFDDISETTTIK VSGKKGARFMLLGGEPLNQKVLLWWNFVADNKADIELAINDWNNNHPRFGNVDSDLKRLEAPALPEGFKE
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 34771; Mature: 34771
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEILEPRIADVGGIPIARLLPNKGKRPIGAWCFMDHAGPAEFGDDEEGMQVGRHPHIN CCCCCCCCCHHCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCE LQTFSWMIEGEVLHKDSIGNEQLITKNQVNVMTAGTGNDQGISHTEQSVFPETGGSADAW EEEEEEEEECEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHH RGMNMVQLWIALPLDQKIERNFHHYPELPSWSTDTADFVLTTGSYTTPQGDSYEAPTIQY CCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE TKLIGLDVHMTQDDDVELTLEPGFEYGILMVVDGIEYQGQQYKQNELIRFDDISETTTIK EEEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEE VSGKKGARFMLLGGEPLNQKVLLWWNFVADNKADIELAINDWNNNHPRFGNVDSDLKRLE EECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHC APALPEGFKE CCCCCCCCCC >Mature Secondary Structure MKTEILEPRIADVGGIPIARLLPNKGKRPIGAWCFMDHAGPAEFGDDEEGMQVGRHPHIN CCCCCCCCCHHCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCE LQTFSWMIEGEVLHKDSIGNEQLITKNQVNVMTAGTGNDQGISHTEQSVFPETGGSADAW EEEEEEEEECEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHH RGMNMVQLWIALPLDQKIERNFHHYPELPSWSTDTADFVLTTGSYTTPQGDSYEAPTIQY CCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE TKLIGLDVHMTQDDDVELTLEPGFEYGILMVVDGIEYQGQQYKQNELIRFDDISETTTIK EEEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEE VSGKKGARFMLLGGEPLNQKVLLWWNFVADNKADIELAINDWNNNHPRFGNVDSDLKRLE EECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHC APALPEGFKE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]