| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148654102
Identifier: 148654102
GI number: 148654102
Start: 2872444
End: 2873055
Strand: Direct
Name: 148654102
Synonym: PsycPRwf_2305
Alternate gene names: NA
Gene position: 2872444-2873055 (Clockwise)
Preceding gene: 148654101
Following gene: 148654106
Centisome position: 96.42
GC content: 43.63
Gene sequence:
>612_bases ATGTCAAATCTACAAGCATTTCAAACACTAGCAGAAGCACGTCGTTCTATCTACGCTATCAACGATCAACTACCAGTATC TAAAGAAGAGATCGTTAAGTTGGTTGAGCACGCTGTATTGCACACGCCATCAGCTTTTAATTCTCAGTCAAGCCGTCTGG TTGTACTATTTGGTGAAGACCACAAAAAATTATGGCAAATCACTGAAGACAAGCTACGCGCTATCGTAAATGACGATACT GCTTTTGAAAGCACCAAACAGAAAATTGACAGCTTCAAAGCGGGCGCTGGTACAGTATTGTTCTATGAAGATCAAACTGT TGTTAAAGGTTTACAAGAAAACTTCGCACTATACGCAGACCGCTTCCCAGTATGGTCAGAGCATGCTAGCGCTATGCATC AGTACGTAGTTTGGACTGCTCTAGCTAGCCAAAACATTGGCGCAAGCTTACAGCACTACAACCCAATCATTGACGAAGAA GTTGACAGCACTTGGAATATCGACCCTGAGTGGGACCTTGTTGCTCAATTAGTATTCGGTGGTATCGAGCAGCCTGCAGG CGAAAAACAATTCGCTCCTGTTGACAGCCGCCTAAAAGTATTCGGTCTATAA
Upstream 100 bases:
>100_bases TTTGCCCTACCTCTTGTAGTATTTAATAATAAATGACGACCTGTACTAAATGAGCTAATCTCACTTTTAATAACATCCAC TCATAAATTGGAGTATTATT
Downstream 100 bases:
>100_bases TTAACTGGCCAATACTGCTGTCCAAAGAGCCCTGATAAACGGCTTACTCATAAAGTTTATCCAAAAAAAGCAGCCCTAAG AAATTAGGGCTGCTTTTTTA
Product: oxidoreductase related to nitroreductase-like protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.; Oxidoreductase/Nitroreductase
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSNLQAFQTLAEARRSIYAINDQLPVSKEEIVKLVEHAVLHTPSAFNSQSSRLVVLFGEDHKKLWQITEDKLRAIVNDDT AFESTKQKIDSFKAGAGTVLFYEDQTVVKGLQENFALYADRFPVWSEHASAMHQYVVWTALASQNIGASLQHYNPIIDEE VDSTWNIDPEWDLVAQLVFGGIEQPAGEKQFAPVDSRLKVFGL
Sequences:
>Translated_203_residues MSNLQAFQTLAEARRSIYAINDQLPVSKEEIVKLVEHAVLHTPSAFNSQSSRLVVLFGEDHKKLWQITEDKLRAIVNDDT AFESTKQKIDSFKAGAGTVLFYEDQTVVKGLQENFALYADRFPVWSEHASAMHQYVVWTALASQNIGASLQHYNPIIDEE VDSTWNIDPEWDLVAQLVFGGIEQPAGEKQFAPVDSRLKVFGL >Mature_202_residues SNLQAFQTLAEARRSIYAINDQLPVSKEEIVKLVEHAVLHTPSAFNSQSSRLVVLFGEDHKKLWQITEDKLRAIVNDDTA FESTKQKIDSFKAGAGTVLFYEDQTVVKGLQENFALYADRFPVWSEHASAMHQYVVWTALASQNIGASLQHYNPIIDEEV DSTWNIDPEWDLVAQLVFGGIEQPAGEKQFAPVDSRLKVFGL
Specific function: Unknown
COG id: COG3560
COG function: function code R; Predicted oxidoreductase related to nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319823, Length=180, Percent_Identity=29.4444444444444, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22853; Mature: 22722
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLQAFQTLAEARRSIYAINDQLPVSKEEIVKLVEHAVLHTPSAFNSQSSRLVVLFGED CCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC HKKLWQITEDKLRAIVNDDTAFESTKQKIDSFKAGAGTVLFYEDQTVVKGLQENFALYAD CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH RFPVWSEHASAMHQYVVWTALASQNIGASLQHYNPIIDEEVDSTWNIDPEWDLVAQLVFG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC GIEQPAGEKQFAPVDSRLKVFGL CCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure SNLQAFQTLAEARRSIYAINDQLPVSKEEIVKLVEHAVLHTPSAFNSQSSRLVVLFGED CHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC HKKLWQITEDKLRAIVNDDTAFESTKQKIDSFKAGAGTVLFYEDQTVVKGLQENFALYAD CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH RFPVWSEHASAMHQYVVWTALASQNIGASLQHYNPIIDEEVDSTWNIDPEWDLVAQLVFG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC GIEQPAGEKQFAPVDSRLKVFGL CCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA