| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148654076
Identifier: 148654076
GI number: 148654076
Start: 2843426
End: 2844247
Strand: Direct
Name: 148654076
Synonym: PsycPRwf_2279
Alternate gene names: NA
Gene position: 2843426-2844247 (Clockwise)
Preceding gene: 148654075
Following gene: 148654084
Centisome position: 95.45
GC content: 47.45
Gene sequence:
>822_bases GTGGAATTAATCATCTTTTTAATCATTGGCGCTCTGGCAGGATTTGCAGCAGGGCTATTTGGCGTGGGCGGTGGTACCAT CATCGTACCGCTGTTGTTTATTGTGTTTACTCAAATGGGCTATGACCCAGATACCATCATGCATCTAGCATTAGGCACCT CACTGGCGACCATTATTGTCACCTCGATAAGCTCACTTATGGCGCACAATAAAAAGGGCTCTGTGATGTGGCCGGTGTTC AAAAACCTAGCTCCTGGCATGGCATTAGGCTGCTTCTTTGGTGCAGGATTGGCCGGCCAGATATCGGGACTACACCTACA GATTATTGTTGGTATCTTCTTGCTGTGGGTTGCCTATAGGATGTTCTTCGGTGGCAAAAAGGCAGCGGCCAGCACGACTG ATGACAATACTGCGCCGGCCATACTGCCGTCAAAACCTAGACAGCTAGCAGCAGGAGGGGTGATTGGTATTGCTTCTGCC ATCTTCGGTATTGGTGGTGGTAGCTTAACTGTGCCTTATTTGACCCGTTATGGCGTGGTTATGCAAAAAGCGGTCGGTAC TTCTGCAGCTTGCGGCTTACCTATTGCCATCGCCGGCGCATTGGGCTTTATGTTATTTGGCATGCAGCAAAAAATAGATG TCCCTAATACCATTGGTTTCGTACACATTTATGCTTTTTTGGGCATCAGTGTCATGAGCTTTTTTACCGCCAAACTGGGC GCAAAAGTGGCGCATATTTTATCACCTGCCATGCTAAAAAAGTGCTTTGCCATATTGCTTACGGTTGTGGGCTGTTATTT TCTCTACAAAGGACTACGTTAA
Upstream 100 bases:
>100_bases TTGCTTAAAAGGCCTTATAAATAACACAGCTTTTAAATGAAATGGCTGTCTCAATAAAGTAGCCCTCTAATCCAACTTTT AACTGAGAAGAAATTACCCT
Downstream 100 bases:
>100_bases GTTTTCGCCTCATTTGTAACTTAATAAGCTTGGCTCAAGCCTGCCATCAAAAAGCCCCTGCTAGATATCTAGCAGGGGCT TTTTCGTGCTTGTCCGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIVTSISSLMAHNKKGSVMWPVF KNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYRMFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASA IFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG AKVAHILSPAMLKKCFAILLTVVGCYFLYKGLR
Sequences:
>Translated_273_residues MELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIVTSISSLMAHNKKGSVMWPVF KNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYRMFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASA IFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG AKVAHILSPAMLKKCFAILLTVVGCYFLYKGLR >Mature_273_residues MELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIVTSISSLMAHNKKGSVMWPVF KNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYRMFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASA IFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG AKVAHILSPAMLKKCFAILLTVVGCYFLYKGLR
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 28432; Mature: 28432
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIV CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TSISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYR HHHHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH MFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVV HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH MQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AKVAHILSPAMLKKCFAILLTVVGCYFLYKGLR HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIV CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TSISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYR HHHHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH MFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVV HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH MQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AKVAHILSPAMLKKCFAILLTVVGCYFLYKGLR HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]