| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yaiI [C]
Identifier: 148654003
GI number: 148654003
Start: 2746029
End: 2746526
Strand: Direct
Name: yaiI [C]
Synonym: PsycPRwf_2206
Alternate gene names: 148654003
Gene position: 2746029-2746526 (Clockwise)
Preceding gene: 148654002
Following gene: 148654010
Centisome position: 92.18
GC content: 45.58
Gene sequence:
>498_bases TTGAGCTTAGATACTCAAGCTACCAATCTGGCCAAACCACAAGCGGGCATGACCATCTGGATTGACGCCGATGCTTGCCC CTTGGTGGTGAAAGATCTGATTACCAAGACGGTTATTCGCACCAATACTCCGGCAATATTTGTCGCCAATCAGCCGATTA AAGTGCGCAAGTCTCCGCTTATTAGCATGAAGGTGGTGGGGTCAGGCTTTGATGTGGCAGATGACTATATTGCCGATCAT GTGTCACCTGGTGATTTGGTGATCACCAGCGATATCCCTTTGGCCAATGATGTGCTAAATAATGGTGGTCAGGTACTAAC CCCACATGGCATTATTTATGACAAAAACAACATTAAGCAGAAGCTAAATGCCCGTGATTTTATGGATACCATGCGCTCAA CGGGCATGCTGGATTTAACCCAAATGGGCGGTCAAAAACCGTATTCGGATAAAGATAAAAAGCAGTTTGCTGATGGGCTT AATAAGTTGGTGCGTTAA
Upstream 100 bases:
>100_bases AGATTGCCCACATAACCTTGATGCCAAATGACGTGGCTGCCCTTGAGCAGGCCTTGGCTGCTTTGGTACGTGCCTTGCCT AATAAGATGGGGCTCGAGTC
Downstream 100 bases:
>100_bases GCTTCGTGTTTCTGCCTAAATTAACGGTGCGTCTTTTATGACTATTTTAGTCATTGATGCAAGTGGCCGTGTGCGCTTAT GACTAAATTCCCTACGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSLDTQATNLAKPQAGMTIWIDADACPLVVKDLITKTVIRTNTPAIFVANQPIKVRKSPLISMKVVGSGFDVADDYIADH VSPGDLVITSDIPLANDVLNNGGQVLTPHGIIYDKNNIKQKLNARDFMDTMRSTGMLDLTQMGGQKPYSDKDKKQFADGL NKLVR
Sequences:
>Translated_165_residues MSLDTQATNLAKPQAGMTIWIDADACPLVVKDLITKTVIRTNTPAIFVANQPIKVRKSPLISMKVVGSGFDVADDYIADH VSPGDLVITSDIPLANDVLNNGGQVLTPHGIIYDKNNIKQKLNARDFMDTMRSTGMLDLTQMGGQKPYSDKDKKQFADGL NKLVR >Mature_164_residues SLDTQATNLAKPQAGMTIWIDADACPLVVKDLITKTVIRTNTPAIFVANQPIKVRKSPLISMKVVGSGFDVADDYIADHV SPGDLVITSDIPLANDVLNNGGQVLTPHGIIYDKNNIKQKLNARDFMDTMRSTGMLDLTQMGGQKPYSDKDKKQFADGLN KLVR
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=146, Percent_Identity=43.8356164383562, Blast_Score=134, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 18000; Mature: 17869
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDTQATNLAKPQAGMTIWIDADACPLVVKDLITKTVIRTNTPAIFVANQPIKVRKSPL CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCC ISMKVVGSGFDVADDYIADHVSPGDLVITSDIPLANDVLNNGGQVLTPHGIIYDKNNIKQ EEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCEECCCCEEECCHHHHH KLNARDFMDTMRSTGMLDLTQMGGQKPYSDKDKKQFADGLNKLVR HHHHHHHHHHHHHCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SLDTQATNLAKPQAGMTIWIDADACPLVVKDLITKTVIRTNTPAIFVANQPIKVRKSPL CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCC ISMKVVGSGFDVADDYIADHVSPGDLVITSDIPLANDVLNNGGQVLTPHGIIYDKNNIKQ EEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCEECCCCEEECCHHHHH KLNARDFMDTMRSTGMLDLTQMGGQKPYSDKDKKQFADGLNKLVR HHHHHHHHHHHHHCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA