| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is purK [H]
Identifier: 148654002
GI number: 148654002
Start: 2744833
End: 2746032
Strand: Direct
Name: purK [H]
Synonym: PsycPRwf_2205
Alternate gene names: 148654002
Gene position: 2744833-2746032 (Clockwise)
Preceding gene: 148654001
Following gene: 148654003
Centisome position: 92.14
GC content: 51.08
Gene sequence:
>1200_bases ATGACCACAGCCAACGCTTATCCTGCCAACCAAACCATCCGCACCATCGGTATTCTAGGTGGCGGTCAACTCGGTATGAT GCTGGCAGAAGCCGCACTACCTTTGGGCTACCGCTGCGTATTTTTAGAAGACGCGCCCCATTGCCCCGCCTCACTATACG GCCAAGTCTTTACCAGTGAGCAATTAGACGACTTCGTTGCTGCAGCCGATGTGTTTACCTTAGAGTTTGAAAACACGCCT GCCAAAACGGTGGCTTGGCTCAAGCAGCTGTCAGATGAGGGCACCAAGCAAGGGATGTATCCACCACCACAAGCCTTAGA GGTGGCGCAGGACCGCTTAAGCGAAAAATCTTTATTTAATGAGCTGGGTATCCAGACCGTGCCATTTAAGAGCGTCAGCT CAGAGCAAGAGTTGCAAGCGGCTGCCCAAGAGCTGGGGCTACCGTTGGTATTAAAGACCAGCCGCGGCGGTTATGATGGT AAGGGTCAATTTGTACTAAAAACAGAAGCAGATATCAATGAGGCCTGGCAGGCTTTGGGGGAGGCTGTGACCGGCAAAGG CAACTTGACCCCCACTCCAGCACCGCTTATCGCAGAAGGATTTATTAACTTTAGCCGCGAAGTTTCTATCATCGCCACCC GTGCTCAAGATGGCAGCATGCGCACCTATGACTTGGTAGAAAACCACCACCACAATGGTATATTGGCCAAGTCGCAAGCG CCTGCCGTGGGTACCAGCCACTTATTGCCTGCTGCTAAGTCTGCCATTGAAACCTTAATGAACCACTTAGATTATGTCGG TACTATGGCACTTGAGCTGTTCGTCAGCAAAGATGCTGCGGGTAAAGATACCATTTTGGCCAATGAGATCGCGCCTCGGG TACACAACTCAGGACATTGGAGCATTGAGGGGGCGGTCACCAGTCAATTCGAGAACCACATCCGTGCTGTGGTCGGTCTA CCACTGGGTGATACCGATAATGTTTATCCGTCAATGATGATTAATGTCTTGGGCCAATATCCCAATATTGAGGAGGTACT AAAAATCGATGGCGCTCATTATCACACCTATCACAAAGAGGAGCGTGACGATCGCAAGATTGCCCACATAACCTTGATGC CAAATGACGTGGCTGCCCTTGAGCAGGCCTTGGCTGCTTTGGTACGTGCCTTGCCTAATAAGATGGGGCTCGAGTCTTGA
Upstream 100 bases:
>100_bases TATTTTTGTGCGATACCCTTGTTGTCCAAATCATCTTATTATTTATTGTTATTTTTACGGTTTTGACTTCTCCTACTTTT CACTAATTTAAGAGCCAAAC
Downstream 100 bases:
>100_bases GCTTAGATACTCAAGCTACCAATCTGGCCAAACCACAAGCGGGCATGACCATCTGGATTGACGCCGATGCTTGCCCCTTG GTGGTGAAAGATCTGATTAC
Product: phosphoribosylaminoimidazole carboxylase, ATPase
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTTANAYPANQTIRTIGILGGGQLGMMLAEAALPLGYRCVFLEDAPHCPASLYGQVFTSEQLDDFVAAADVFTLEFENTP AKTVAWLKQLSDEGTKQGMYPPPQALEVAQDRLSEKSLFNELGIQTVPFKSVSSEQELQAAAQELGLPLVLKTSRGGYDG KGQFVLKTEADINEAWQALGEAVTGKGNLTPTPAPLIAEGFINFSREVSIIATRAQDGSMRTYDLVENHHHNGILAKSQA PAVGTSHLLPAAKSAIETLMNHLDYVGTMALELFVSKDAAGKDTILANEIAPRVHNSGHWSIEGAVTSQFENHIRAVVGL PLGDTDNVYPSMMINVLGQYPNIEEVLKIDGAHYHTYHKEERDDRKIAHITLMPNDVAALEQALAALVRALPNKMGLES
Sequences:
>Translated_399_residues MTTANAYPANQTIRTIGILGGGQLGMMLAEAALPLGYRCVFLEDAPHCPASLYGQVFTSEQLDDFVAAADVFTLEFENTP AKTVAWLKQLSDEGTKQGMYPPPQALEVAQDRLSEKSLFNELGIQTVPFKSVSSEQELQAAAQELGLPLVLKTSRGGYDG KGQFVLKTEADINEAWQALGEAVTGKGNLTPTPAPLIAEGFINFSREVSIIATRAQDGSMRTYDLVENHHHNGILAKSQA PAVGTSHLLPAAKSAIETLMNHLDYVGTMALELFVSKDAAGKDTILANEIAPRVHNSGHWSIEGAVTSQFENHIRAVVGL PLGDTDNVYPSMMINVLGQYPNIEEVLKIDGAHYHTYHKEERDDRKIAHITLMPNDVAALEQALAALVRALPNKMGLES >Mature_398_residues TTANAYPANQTIRTIGILGGGQLGMMLAEAALPLGYRCVFLEDAPHCPASLYGQVFTSEQLDDFVAAADVFTLEFENTPA KTVAWLKQLSDEGTKQGMYPPPQALEVAQDRLSEKSLFNELGIQTVPFKSVSSEQELQAAAQELGLPLVLKTSRGGYDGK GQFVLKTEADINEAWQALGEAVTGKGNLTPTPAPLIAEGFINFSREVSIIATRAQDGSMRTYDLVENHHHNGILAKSQAP AVGTSHLLPAAKSAIETLMNHLDYVGTMALELFVSKDAAGKDTILANEIAPRVHNSGHWSIEGAVTSQFENHIRAVVGLP LGDTDNVYPSMMINVLGQYPNIEEVLKIDGAHYHTYHKEERDDRKIAHITLMPNDVAALEQALAALVRALPNKMGLES
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=380, Percent_Identity=34.2105263157895, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI1788155, Length=331, Percent_Identity=24.773413897281, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324702, Length=394, Percent_Identity=32.741116751269, Blast_Score=192, Evalue=8e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 43155; Mature: 43024
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTANAYPANQTIRTIGILGGGQLGMMLAEAALPLGYRCVFLEDAPHCPASLYGQVFTSE CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHH QLDDFVAAADVFTLEFENTPAKTVAWLKQLSDEGTKQGMYPPPQALEVAQDRLSEKSLFN HHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGIQTVPFKSVSSEQELQAAAQELGLPLVLKTSRGGYDGKGQFVLKTEADINEAWQALG HCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHH EAVTGKGNLTPTPAPLIAEGFINFSREVSIIATRAQDGSMRTYDLVENHHHNGILAKSQA HHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCEEECCCC PAVGTSHLLPAAKSAIETLMNHLDYVGTMALELFVSKDAAGKDTILANEIAPRVHNSGHW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCE SIEGAVTSQFENHIRAVVGLPLGDTDNVYPSMMINVLGQYPNIEEVLKIDGAHYHTYHKE EEEHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCEEECCCCC ERDDRKIAHITLMPNDVAALEQALAALVRALPNKMGLES CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTANAYPANQTIRTIGILGGGQLGMMLAEAALPLGYRCVFLEDAPHCPASLYGQVFTSE CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHH QLDDFVAAADVFTLEFENTPAKTVAWLKQLSDEGTKQGMYPPPQALEVAQDRLSEKSLFN HHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGIQTVPFKSVSSEQELQAAAQELGLPLVLKTSRGGYDGKGQFVLKTEADINEAWQALG HCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHH EAVTGKGNLTPTPAPLIAEGFINFSREVSIIATRAQDGSMRTYDLVENHHHNGILAKSQA HHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCEEECCCC PAVGTSHLLPAAKSAIETLMNHLDYVGTMALELFVSKDAAGKDTILANEIAPRVHNSGHW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCE SIEGAVTSQFENHIRAVVGLPLGDTDNVYPSMMINVLGQYPNIEEVLKIDGAHYHTYHKE EEEHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCEEECCCCC ERDDRKIAHITLMPNDVAALEQALAALVRALPNKMGLES CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8816818; 10984043 [H]