| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is purE [H]
Identifier: 148654001
GI number: 148654001
Start: 2744098
End: 2744658
Strand: Direct
Name: purE [H]
Synonym: PsycPRwf_2204
Alternate gene names: 148654001
Gene position: 2744098-2744658 (Clockwise)
Preceding gene: 148654000
Following gene: 148654002
Centisome position: 92.12
GC content: 51.52
Gene sequence:
>561_bases ATGGCAAATGCCACCAACCACCCGCAAGCTGACGCTCCTCTTGGACCGATTCAATCTCCTGCAGGCACCCCAAAAGTGGG CATTATTATGGGCTCGCAATCTGATTGGGCCACCATGAGTTTGGGTGTTCAATTATTGGCCGACTTCGGTGTGCCTTTTG AGTGTGAGGTTGTCTCAGCCCATCGCACTCCAGACAAGCTATTTGATTATGCTAAATCTGCTAAAGACAAAGGTCTACAG GTGATCATCGCCGGCGCAGGCGGCGCCGCGCATCTGCCCGGTATGTGTGCCAGCCAAACTGAGCTGCCGGTACTTGGCGT ACCAGTGAAATCCTCAACCCTAAGCGGCTGGGACAGCTTGTTATCAATTGTACAGATGCCAAAAGGTATTGCTGTAGGCA CCTTAGCCATTGGCACAGCAGGTGCTTATAACGCAGGTTTACTGGCGATTCAGATTCTGGCTTTACAAGATGACGCACTG GCCAAACAGCTGGTTGAGTTTCGTCAAAATCAGACTGAAACGGTATTGGCGAGCCCGACCCCTGGCATCATAAACAGCTA A
Upstream 100 bases:
>100_bases AGATGGCTTTAAATAAGCGTTAATTGGGTTTTGAAAAAGGTGCTTTTTATTAGCGCAAAAATTTTGTATGATGAATGTTT TTTGCAAGGAAACTCAAACC
Downstream 100 bases:
>100_bases GTTTGCTATACTTGAGTAGTAATAGACGAACCAGATGGTGAACAAAGGGGTGCTGTGAGCACCTTTTTGTTTTTTATTTT TGTGCGATACCCTTGTTGTC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MANATNHPQADAPLGPIQSPAGTPKVGIIMGSQSDWATMSLGVQLLADFGVPFECEVVSAHRTPDKLFDYAKSAKDKGLQ VIIAGAGGAAHLPGMCASQTELPVLGVPVKSSTLSGWDSLLSIVQMPKGIAVGTLAIGTAGAYNAGLLAIQILALQDDAL AKQLVEFRQNQTETVLASPTPGIINS
Sequences:
>Translated_186_residues MANATNHPQADAPLGPIQSPAGTPKVGIIMGSQSDWATMSLGVQLLADFGVPFECEVVSAHRTPDKLFDYAKSAKDKGLQ VIIAGAGGAAHLPGMCASQTELPVLGVPVKSSTLSGWDSLLSIVQMPKGIAVGTLAIGTAGAYNAGLLAIQILALQDDAL AKQLVEFRQNQTETVLASPTPGIINS >Mature_185_residues ANATNHPQADAPLGPIQSPAGTPKVGIIMGSQSDWATMSLGVQLLADFGVPFECEVVSAHRTPDKLFDYAKSAKDKGLQV IIAGAGGAAHLPGMCASQTELPVLGVPVKSSTLSGWDSLLSIVQMPKGIAVGTLAIGTAGAYNAGLLAIQILALQDDALA KQLVEFRQNQTETVLASPTPGIINS
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=157, Percent_Identity=63.0573248407643, Blast_Score=170, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6324702, Length=153, Percent_Identity=55.5555555555556, Blast_Score=163, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 19071; Mature: 18940
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANATNHPQADAPLGPIQSPAGTPKVGIIMGSQSDWATMSLGVQLLADFGVPFECEVVSA CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEC HRTPDKLFDYAKSAKDKGLQVIIAGAGGAAHLPGMCASQTELPVLGVPVKSSTLSGWDSL CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LSIVQMPKGIAVGTLAIGTAGAYNAGLLAIQILALQDDALAKQLVEFRQNQTETVLASPT HHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEEECCC PGIINS CCCCCC >Mature Secondary Structure ANATNHPQADAPLGPIQSPAGTPKVGIIMGSQSDWATMSLGVQLLADFGVPFECEVVSA CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEC HRTPDKLFDYAKSAKDKGLQVIIAGAGGAAHLPGMCASQTELPVLGVPVKSSTLSGWDSL CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LSIVQMPKGIAVGTLAIGTAGAYNAGLLAIQILALQDDALAKQLVEFRQNQTETVLASPT HHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEEECCC PGIINS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]