Click here to switch to the map view.

The map label for this gene is ccmC [H]

Identifier: 148653963

GI number: 148653963

Start: 2703298

End: 2704086

Strand: Direct

Name: ccmC [H]

Synonym: PsycPRwf_2166

Alternate gene names: 148653963

Gene position: 2703298-2704086 (Clockwise)

Preceding gene: 148653962

Following gene: 148653964

Centisome position: 90.75

GC content: 47.78

Gene sequence:

>789_bases
ATGCCAAACGCTAATTTATCACCTCAAAACCCGGGCTTTTTTTCACGCCTATGGCAGGGCTTTTTGGCCACTGTTGGTAC
CCGTGAATTCTTTCGTATCTTCACGCCTTGGGTAAAGTGGCTGGCGGCATTGGCCACTATTATGTTGGTAGTCGGCAGTG
TTTGGGGGCTGGCCTTTGCGCCACCTGATTATCTACAAGGCAACAGCTATCGCATTATTTTTATCCATGTGCCTGCTGCC
GGTATCGCCTTATCTATTTATTTTGCGCTTGCGGTACTGGGCGTGATATTTTTGGTGTGGCGTATTAAGACCGCCAACCT
AGTGGCTCAAGCAATCGCCCCCATCGGATTTATGCTGTGTGTTTTAAGTTTAATAACAGGATCAATTTGGGCCAAGCCGA
CCTGGGGTACTTTTTGGGTATGGGATGCTCGCCTGACCTCGATGCTGATTTTAGCGTTTTTATACGCAGGTGTGATGGCG
CTATTTGCCGCCTTTGAGCATTCACCAAACCGCGGCAAAGCTGCTGCTATTTTATCGATTGTGGGCGCAGTTAACCTGCC
CATTATCAAGTACTCAGTAAACTGGTGGAACACCCTACACCAAGGCTCTACCATTACCCTCACTGAAGCACCAAAGATGT
CATTAGATATGTTGGCGCCTTTACTATTGATGATTATTGGTAGCTACCTGTTGGTGGCCGCCTTAGCCATTTATCGCACC
AACACCCTTATCCTACGCCGCGATCAAAATAAGGCTTGGGTCAAAGAATATGTGCGTGACGCCAAATAA

Upstream 100 bases:

>100_bases
GAATCCATGGCTTAACTTACCGAGCGCCTCACTGACTCGTGTGTGGGACTGTTTGCCCACACTTCCTTGCTCACACTGTG
GCTTACAAGGTCGTTTTATT

Downstream 100 bases:

>100_bases
AGGAGCGACTTATGCAGCCGTATTTTTATAGCTTTCAAGAGTTTTTGGCCATGGGTAAGCATGGTATGTATGTCTGGAGC
ACTTGGGTTCTTACCTTAAT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFAPPDYLQGNSYRIIFIHVPAA
GIALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLCVLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMA
LFAAFEHSPNRGKAAAILSIVGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRT
NTLILRRDQNKAWVKEYVRDAK

Sequences:

>Translated_262_residues
MPNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFAPPDYLQGNSYRIIFIHVPAA
GIALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLCVLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMA
LFAAFEHSPNRGKAAAILSIVGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRT
NTLILRRDQNKAWVKEYVRDAK
>Mature_261_residues
PNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFAPPDYLQGNSYRIIFIHVPAAG
IALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLCVLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMAL
FAAFEHSPNRGKAAAILSIVGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRTN
TLILRRDQNKAWVKEYVRDAK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=232, Percent_Identity=50.4310344827586, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29092; Mature: 28961

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPDYLQGNSYRIIFIHVPAAGIALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLC
CCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMALFAAFEHSPNRGKAAAILSI
HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRT
HHHHCCCEEEEECHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NTLILRRDQNKAWVKEYVRDAK
CEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure 
PNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPDYLQGNSYRIIFIHVPAAGIALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLC
CCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMALFAAFEHSPNRGKAAAILSI
HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRT
HHHHCCCEEEEECHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NTLILRRDQNKAWVKEYVRDAK
CEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]