Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is ccmD [C]

Identifier: 148653964

GI number: 148653964

Start: 2704098

End: 2704301

Strand: Direct

Name: ccmD [C]

Synonym: PsycPRwf_2167

Alternate gene names: 148653964

Gene position: 2704098-2704301 (Clockwise)

Preceding gene: 148653963

Following gene: 148653965

Centisome position: 90.77

GC content: 46.57

Gene sequence:

>204_bases
ATGCAGCCGTATTTTTATAGCTTTCAAGAGTTTTTGGCCATGGGTAAGCATGGTATGTATGTCTGGAGCACTTGGGTTCT
TACCTTAATTGTGGTACTGGGCTTTGTCTTATATAGTGTGCACCAACGTCGCCAACTGGTCAAAGATCTAAAAATCCAGC
ATACCCGTCAACAGCAGCGCAAGCAAGCTCAGCGCCGCCCGTAA

Upstream 100 bases:

>100_bases
CCTTAGCCATTTATCGCACCAACACCCTTATCCTACGCCGCGATCAAAATAAGGCTTGGGTCAAAGAATATGTGCGTGAC
GCCAAATAAAGGAGCGACTT

Downstream 100 bases:

>100_bases
GCAATACTCTATCTGACTAAATTAGGCCTGTTTTTTGGTGCATGTTTTTATAATGGCTCAAAAACAGAACCCAACTTTTG
CAACAACACTCAATGATTTG

Product: Heme exporter protein CcmD

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein CcmD

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP

Sequences:

>Translated_67_residues
MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP
>Mature_67_residues
MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP

Specific function: Required For The Export Of Heme To The Periplasm For The Biogenesis Of C-Type Cytochromes (Potential). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8197; Mature: 8197

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAQRRP
HHHHCCC
>Mature Secondary Structure
MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAQRRP
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA