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The map label for this gene is panD

Identifier: 148653905

GI number: 148653905

Start: 2630498

End: 2630878

Strand: Direct

Name: panD

Synonym: PsycPRwf_2108

Alternate gene names: 148653905

Gene position: 2630498-2630878 (Clockwise)

Preceding gene: 148653904

Following gene: 148653906

Centisome position: 88.3

GC content: 43.04

Gene sequence:

>381_bases
ATGTTATTGACCTTATTAAAAGGCAAATTACACCGTGCCCGCGTTACCCATGCAGATTTGCACTATGAAGGCTCTTGTGG
GATAGATGGCGACTTATTGGATCTAGCTGGTATTCGTGAAAACGAATCCATTGATATCTACAACGTCAGCAATGGCAAGC
GCTTTCGCACTTATGCCATCCGTGCTGAAGCCGGCTCTGGTATTATTTCATTAAATGGTGCTGCCGCTTATATGGCAGAC
TTAGGCGACATCGTTATCATTTGTGCTTACGCTCAGATGGATGAGCAAGAAGCCGATACGCATAAACCAAAACTAGTCTA
TTGTAATGAAGACAATACTGTAAAAGATACGGCCAATATCATTCCGGTCCAAGTGTCTTAA

Upstream 100 bases:

>100_bases
TATTCAAAAAATAGCAGAATAGTGCTGTTTTTATGAGTATAATTTGCTCTCACGTTTTTTGCGTACAATTTTTCCGGCCC
ATTATTTCAAGGAATCCTCT

Downstream 100 bases:

>100_bases
TCCCTACCCTTTATTCCCCCTTTTAGTAAATGCTAAGCGATTCACTTTGCTTAGCATTTTTTATTTTTATTATCCTATTA
TTTTTATTAATCCGTATGGG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLLTLLKGKLHRARVTHADLHYEGSCGIDGDLLDLAGIRENESIDIYNVSNGKRFRTYAIRAEAGSGIISLNGAAAYMAD
LGDIVIICAYAQMDEQEADTHKPKLVYCNEDNTVKDTANIIPVQVS

Sequences:

>Translated_126_residues
MLLTLLKGKLHRARVTHADLHYEGSCGIDGDLLDLAGIRENESIDIYNVSNGKRFRTYAIRAEAGSGIISLNGAAAYMAD
LGDIVIICAYAQMDEQEADTHKPKLVYCNEDNTVKDTANIIPVQVS
>Mature_126_residues
MLLTLLKGKLHRARVTHADLHYEGSCGIDGDLLDLAGIRENESIDIYNVSNGKRFRTYAIRAEAGSGIISLNGAAAYMAD
LGDIVIICAYAQMDEQEADTHKPKLVYCNEDNTVKDTANIIPVQVS

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=63.4920634920635, Blast_Score=168, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_PSYWF (A5WHA7)

Other databases:

- EMBL:   CP000713
- RefSeq:   YP_001280998.1
- ProteinModelPortal:   A5WHA7
- SMR:   A5WHA7
- STRING:   A5WHA7
- GeneID:   5206777
- GenomeReviews:   CP000713_GR
- KEGG:   prw:PsycPRwf_2108
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   VMNEQEV
- ProtClustDB:   PRK05449
- BioCyc:   PSP56811:PSYCPRWF_2108-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13754; Mature: 13754

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTLLKGKLHRARVTHADLHYEGSCGIDGDLLDLAGIRENESIDIYNVSNGKRFRTYAI
CEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEE
RAEAGSGIISLNGAAAYMADLGDIVIICAYAQMDEQEADTHKPKLVYCNEDNTVKDTANI
EECCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCE
IPVQVS
EEEEEC
>Mature Secondary Structure
MLLTLLKGKLHRARVTHADLHYEGSCGIDGDLLDLAGIRENESIDIYNVSNGKRFRTYAI
CEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEE
RAEAGSGIISLNGAAAYMADLGDIVIICAYAQMDEQEADTHKPKLVYCNEDNTVKDTANI
EECCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCE
IPVQVS
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA