| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is prs [H]
Identifier: 148653902
GI number: 148653902
Start: 2627784
End: 2628740
Strand: Direct
Name: prs [H]
Synonym: PsycPRwf_2105
Alternate gene names: 148653902
Gene position: 2627784-2628740 (Clockwise)
Preceding gene: 148653901
Following gene: 148653903
Centisome position: 88.21
GC content: 47.34
Gene sequence:
>957_bases ATGCCATATCTGGCGATTTTTACGGGTAATGCCCACCCTGAGTTGGCAAAAACTGTCGCAGATCACTTACACATTCCTCT TGGCCGTGCTGATGTCACGCGCTTCTCTGACGGTGAAATCGCTGTTGAGATTAAAGAGCACGTACGTGGTAAAGACGTCT TCATTCTACAACCTACTTGCGCCCCTACCAACGATAACTTGATGGAAATCATGGTGATGGCTGATGCACTGCGTCGTTCA AGTGCCGGTCGTATCACTGCGGTTATGCCCTACTTCGGCTATGCCCGTCAGGATCGTCGTCCCCGTTCAGCGCGTGTGCC TATTTCGGCAAAAGTAGTGGCAGACATGCTAAACATCGTTAGCATTGATCGTGTGATGACTGTCGATTTGCACTCTGACC AAATTCAAGGTTTCTTTGACATTCCAGTAGATAACATCTACGGTACGCCAGTATTGTTAAAAGACCTTAGAAAGCAAGGC TACGACAACCTAATGGTTGTGTCACCAGACGTAGGTGGTGTTGTTCGTGCGCGTGCTATGGCCAAAGAGCTTGGCGGTAA CACCGAGCTTGCCATCATCGACAAGCGTCGTGCTCGTGCTAATGAATCACAAGTTATGCATATCATTGGTGATGTAAAAG ACCGTGATTGTGTGATTGTTGATGACATGGTAGATACCGCAGGCACGCTATGTAAAGCCGCCCAAGCCCTTAAAGACAAT GGCGCCCGTCGCGTATTAGGTTATATCACTCACCCTGTATTATCGGGTAATGCGATTAAAACCATTGGCGAATCTGTGTT GGATGAGCTGGTCGTAACGGACAGTATTCCTTTGTCTGATGAAGCTAAGGCTTGCAGCAAAATTCGTCAAGTGACCATTG CTTCACTATTGGCCGAAAGCTTACGCCGTATCAACAATGAAGAGTCTATCAGTGCAATGTTTGAGTCTATCGACTAA
Upstream 100 bases:
>100_bases AGTCCAGCTACCCCTGCCATTTTCTAAACGTTCAACTTTCTTCTTTATTTGTGCAGTCTCTACTGCTCCTCTCCTAAGTC AAATAAATAGGACTTGAACC
Downstream 100 bases:
>100_bases TCACTGCAGCCTGATGACTAACAAAAAAACCGCCCGCTAATGCCGGGCGGTTTTTTTGTGCTAGATTTTAATGCCCATTA CCCGTATAATACGGCCTTTG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPYLAIFTGNAHPELAKTVADHLHIPLGRADVTRFSDGEIAVEIKEHVRGKDVFILQPTCAPTNDNLMEIMVMADALRRS SAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLKDLRKQG YDNLMVVSPDVGGVVRARAMAKELGGNTELAIIDKRRARANESQVMHIIGDVKDRDCVIVDDMVDTAGTLCKAAQALKDN GARRVLGYITHPVLSGNAIKTIGESVLDELVVTDSIPLSDEAKACSKIRQVTIASLLAESLRRINNEESISAMFESID
Sequences:
>Translated_318_residues MPYLAIFTGNAHPELAKTVADHLHIPLGRADVTRFSDGEIAVEIKEHVRGKDVFILQPTCAPTNDNLMEIMVMADALRRS SAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLKDLRKQG YDNLMVVSPDVGGVVRARAMAKELGGNTELAIIDKRRARANESQVMHIIGDVKDRDCVIVDDMVDTAGTLCKAAQALKDN GARRVLGYITHPVLSGNAIKTIGESVLDELVVTDSIPLSDEAKACSKIRQVTIASLLAESLRRINNEESISAMFESID >Mature_317_residues PYLAIFTGNAHPELAKTVADHLHIPLGRADVTRFSDGEIAVEIKEHVRGKDVFILQPTCAPTNDNLMEIMVMADALRRSS AGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLKDLRKQGY DNLMVVSPDVGGVVRARAMAKELGGNTELAIIDKRRARANESQVMHIIGDVKDRDCVIVDDMVDTAGTLCKAAQALKDNG ARRVLGYITHPVLSGNAIKTIGESVLDELVVTDSIPLSDEAKACSKIRQVTIASLLAESLRRINNEESISAMFESID
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=319, Percent_Identity=47.3354231974922, Blast_Score=309, Evalue=2e-84, Organism=Homo sapiens, GI4506129, Length=319, Percent_Identity=46.3949843260188, Blast_Score=307, Evalue=1e-83, Organism=Homo sapiens, GI84875539, Length=321, Percent_Identity=45.7943925233645, Blast_Score=305, Evalue=3e-83, Organism=Homo sapiens, GI28557709, Length=319, Percent_Identity=46.3949843260188, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=34.7826086956522, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4506133, Length=348, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI310128524, Length=148, Percent_Identity=27.7027027027027, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310115209, Length=148, Percent_Identity=27.7027027027027, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310118259, Length=148, Percent_Identity=27.7027027027027, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310119946, Length=148, Percent_Identity=27.7027027027027, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1787458, Length=315, Percent_Identity=66.984126984127, Blast_Score=446, Evalue=1e-127, Organism=Caenorhabditis elegans, GI25149168, Length=319, Percent_Identity=42.3197492163009, Blast_Score=285, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17554702, Length=319, Percent_Identity=42.3197492163009, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI71989924, Length=319, Percent_Identity=42.3197492163009, Blast_Score=283, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17554704, Length=314, Percent_Identity=42.3566878980892, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17570245, Length=341, Percent_Identity=33.4310850439883, Blast_Score=190, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6321776, Length=315, Percent_Identity=44.7619047619048, Blast_Score=270, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6320946, Length=314, Percent_Identity=41.4012738853503, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6319403, Length=315, Percent_Identity=41.5873015873016, Blast_Score=252, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6322667, Length=206, Percent_Identity=38.8349514563107, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=40.3508771929825, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI21355239, Length=319, Percent_Identity=44.8275862068966, Blast_Score=291, Evalue=3e-79, Organism=Drosophila melanogaster, GI45551540, Length=341, Percent_Identity=41.9354838709677, Blast_Score=282, Evalue=2e-76, Organism=Drosophila melanogaster, GI24651458, Length=359, Percent_Identity=33.1476323119777, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24651456, Length=359, Percent_Identity=33.1476323119777, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI281362873, Length=359, Percent_Identity=33.1476323119777, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24651454, Length=359, Percent_Identity=33.1476323119777, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24651462, Length=376, Percent_Identity=32.1808510638298, Blast_Score=194, Evalue=5e-50, Organism=Drosophila melanogaster, GI24651464, Length=376, Percent_Identity=32.1808510638298, Blast_Score=194, Evalue=5e-50, Organism=Drosophila melanogaster, GI45552010, Length=376, Percent_Identity=32.1808510638298, Blast_Score=194, Evalue=8e-50,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34821; Mature: 34689
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLAIFTGNAHPELAKTVADHLHIPLGRADVTRFSDGEIAVEIKEHVRGKDVFILQPTC CCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEHHHCCCCEEEEECCCC APTNDNLMEIMVMADALRRSSAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIV CCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH SIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLKDLRKQGYDNLMVVSPDVGGVVRARAM HHCCEEEEEECHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH AKELGGNTELAIIDKRRARANESQVMHIIGDVKDRDCVIVDDMVDTAGTLCKAAQALKDN HHHHCCCCEEEEEECHHHCCCHHHEEHEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCC GARRVLGYITHPVLSGNAIKTIGESVLDELVVTDSIPLSDEAKACSKIRQVTIASLLAES CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRINNEESISAMFESID HHHCCCHHHHHHHHHHCC >Mature Secondary Structure PYLAIFTGNAHPELAKTVADHLHIPLGRADVTRFSDGEIAVEIKEHVRGKDVFILQPTC CEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEHHHCCCCEEEEECCCC APTNDNLMEIMVMADALRRSSAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIV CCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH SIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLKDLRKQGYDNLMVVSPDVGGVVRARAM HHCCEEEEEECHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH AKELGGNTELAIIDKRRARANESQVMHIIGDVKDRDCVIVDDMVDTAGTLCKAAQALKDN HHHHCCCCEEEEEECHHHCCCHHHEEHEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCC GARRVLGYITHPVLSGNAIKTIGESVLDELVVTDSIPLSDEAKACSKIRQVTIASLLAES CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRINNEESISAMFESID HHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]