| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653794
Identifier: 148653794
GI number: 148653794
Start: 2488190
End: 2489293
Strand: Direct
Name: 148653794
Synonym: PsycPRwf_1997
Alternate gene names: NA
Gene position: 2488190-2489293 (Clockwise)
Preceding gene: 148653793
Following gene: 148653796
Centisome position: 83.53
GC content: 50.54
Gene sequence:
>1104_bases ATGCCCTCAAAACCCACCACCAAAATATTCGACGTCATCGTCATCGGTGGCGGTCAAGCCGGCTTAGCAGTTGGCTACTA CCTAAAACGTGCCAGCCGAAAACAATCCCTCGACTTTATCATCCTAGATAATCAACCCAATAGCGGCGGCGCGTGGCAAC ACTTTTGGCCATCATTACGCCTGTTCTCGCCAGCATCGGTCAGCTCACTGCCGGGCAGAATGATGACCTCTGCTCAAGAC GAAAGCAGTCCGTATTTAACAGACGTTTTGGACTACTTTGATAACTACGAAAAGCATTATAAGTTGCCCATCTACCGCCC CTATGAGGTACAAAGCGTCGAGCGAGATGAGGATAACGACTGCTTGCGAGTCAGCGACGGTAAGCTCACGTGGCTTGCTC GAGCGGTGGTCAGTGCCACTGGCATCTGGAGCAATCCTTATATTCCACAGATTGAAGGACGGCAACTATTTAATGGTGAG CAAACCCATTCAGCGCATTATGCAGGGCCGCAGGCTTACAAAGGCAAACGTGTCTTGGTTGTGGGCGGCGGCAACTCTGG CGCACAAATCTTCGCAGAATTAGTGCAAGTGGCCAATGCCAGCTGGGCAACCCGAGAGGAACCACAGTTTTTGCCCGATG ATGTGGATGGTCGGGTGTTGTTTGAAAGAGCCTCAAAACGTATTAGAAGCAGCGCCAGTGATGAGTCTGAAGGTGATGAT ACTGACCAACAAGGACCCAAAGGCAATATCGTGATGATGCCAGCGATTAAAGAGGCTCGTGATAAAGGATTGTTAACGAC ACAGCCTATGTTTGAGCGTTTGACTGAACAAGGCGTTGTTTGGTCTGATGGTACCGAGGAATCAATTGATGCGATTATTT GGTGTACTGGCTTTAACCCAGAGCTTGAGCATTTAGCGCCTTTGGGTGTGATTGAAGAAGATGGCAAGGTATTGACCGAA CAGGGGCAGTCGGTAAAAGAGCCTCGCTTGTGGTTATTTGGCTACGGCGATTGGGTCAGCCCAGCGTCGGCGACCATCAT TGGTGCTGGGCGTAGTGCGCGAGAAAACGTGCCTGCTTTGGTTGAGTTTGTTCAGGGTTTGTAG
Upstream 100 bases:
>100_bases AGAAGACACCAATAATTTAACAAAAAATCTGAGATGATTCAGCTTTTACTTTTAATCAAATATAATCTCCATCCCCTACT ATCTTAACCCGAGAAAAACT
Downstream 100 bases:
>100_bases GTTGGCGTCGAGGTACGAGACCCAACCCCCACCAAGCCTCAAACAACCTTTTCACCTAAATAAACTCTCGTCTCACATCC ACTATTCGCGCCTCAACCAC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MPSKPTTKIFDVIVIGGGQAGLAVGYYLKRASRKQSLDFIILDNQPNSGGAWQHFWPSLRLFSPASVSSLPGRMMTSAQD ESSPYLTDVLDYFDNYEKHYKLPIYRPYEVQSVERDEDNDCLRVSDGKLTWLARAVVSATGIWSNPYIPQIEGRQLFNGE QTHSAHYAGPQAYKGKRVLVVGGGNSGAQIFAELVQVANASWATREEPQFLPDDVDGRVLFERASKRIRSSASDESEGDD TDQQGPKGNIVMMPAIKEARDKGLLTTQPMFERLTEQGVVWSDGTEESIDAIIWCTGFNPELEHLAPLGVIEEDGKVLTE QGQSVKEPRLWLFGYGDWVSPASATIIGAGRSARENVPALVEFVQGL
Sequences:
>Translated_367_residues MPSKPTTKIFDVIVIGGGQAGLAVGYYLKRASRKQSLDFIILDNQPNSGGAWQHFWPSLRLFSPASVSSLPGRMMTSAQD ESSPYLTDVLDYFDNYEKHYKLPIYRPYEVQSVERDEDNDCLRVSDGKLTWLARAVVSATGIWSNPYIPQIEGRQLFNGE QTHSAHYAGPQAYKGKRVLVVGGGNSGAQIFAELVQVANASWATREEPQFLPDDVDGRVLFERASKRIRSSASDESEGDD TDQQGPKGNIVMMPAIKEARDKGLLTTQPMFERLTEQGVVWSDGTEESIDAIIWCTGFNPELEHLAPLGVIEEDGKVLTE QGQSVKEPRLWLFGYGDWVSPASATIIGAGRSARENVPALVEFVQGL >Mature_366_residues PSKPTTKIFDVIVIGGGQAGLAVGYYLKRASRKQSLDFIILDNQPNSGGAWQHFWPSLRLFSPASVSSLPGRMMTSAQDE SSPYLTDVLDYFDNYEKHYKLPIYRPYEVQSVERDEDNDCLRVSDGKLTWLARAVVSATGIWSNPYIPQIEGRQLFNGEQ THSAHYAGPQAYKGKRVLVVGGGNSGAQIFAELVQVANASWATREEPQFLPDDVDGRVLFERASKRIRSSASDESEGDDT DQQGPKGNIVMMPAIKEARDKGLLTTQPMFERLTEQGVVWSDGTEESIDAIIWCTGFNPELEHLAPLGVIEEDGKVLTEQ GQSVKEPRLWLFGYGDWVSPASATIIGAGRSARENVPALVEFVQGL
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503759, Length=337, Percent_Identity=24.6290801186944, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17555726, Length=337, Percent_Identity=24.0356083086053, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 40518; Mature: 40387
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKPTTKIFDVIVIGGGQAGLAVGYYLKRASRKQSLDFIILDNQPNSGGAWQHFWPSLR CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCE LFSPASVSSLPGRMMTSAQDESSPYLTDVLDYFDNYEKHYKLPIYRPYEVQSVERDEDND EECCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCC CLRVSDGKLTWLARAVVSATGIWSNPYIPQIEGRQLFNGEQTHSAHYAGPQAYKGKRVLV EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE VGGGNSGAQIFAELVQVANASWATREEPQFLPDDVDGRVLFERASKRIRSSASDESEGDD EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TDQQGPKGNIVMMPAIKEARDKGLLTTQPMFERLTEQGVVWSDGTEESIDAIIWCTGFNP CCCCCCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEEEECCCC ELEHLAPLGVIEEDGKVLTEQGQSVKEPRLWLFGYGDWVSPASATIIGAGRSARENVPAL CHHHHCCCCEEECCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHH VEFVQGL HHHHHCC >Mature Secondary Structure PSKPTTKIFDVIVIGGGQAGLAVGYYLKRASRKQSLDFIILDNQPNSGGAWQHFWPSLR CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCE LFSPASVSSLPGRMMTSAQDESSPYLTDVLDYFDNYEKHYKLPIYRPYEVQSVERDEDND EECCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCC CLRVSDGKLTWLARAVVSATGIWSNPYIPQIEGRQLFNGEQTHSAHYAGPQAYKGKRVLV EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE VGGGNSGAQIFAELVQVANASWATREEPQFLPDDVDGRVLFERASKRIRSSASDESEGDD EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TDQQGPKGNIVMMPAIKEARDKGLLTTQPMFERLTEQGVVWSDGTEESIDAIIWCTGFNP CCCCCCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEEEECCCC ELEHLAPLGVIEEDGKVLTEQGQSVKEPRLWLFGYGDWVSPASATIIGAGRSARENVPAL CHHHHCCCCEEECCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHH VEFVQGL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA