| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is lip2 [H]
Identifier: 148653796
GI number: 148653796
Start: 2489857
End: 2490915
Strand: Direct
Name: lip2 [H]
Synonym: PsycPRwf_1999
Alternate gene names: 148653796
Gene position: 2489857-2490915 (Clockwise)
Preceding gene: 148653794
Following gene: 148653797
Centisome position: 83.58
GC content: 50.24
Gene sequence:
>1059_bases ATGACTATTATTAATAAATCCAACCTCCATCAGCTGAGTACAAAAACCCGCAATGCCTTGATGAAAAGCGTGGTGCGCTT GCCGACAGCAGCCAAACAACAGATAGCAGGTGAGCCTATTGTCATTGATGGGCAAACCTTTGATTTATCCCTACAAGTGA TGCTACAGCTGTTCGGTCCACCGCCCAATCATCTGCCCAGTGTCACAGAAGCTCGAGCAACCATTGAGGCGCAAAGCCCT GTGCTCAGTCAGACACCTCTGGACGATATTATCAAAGATGAGTTCCCACTAACGGTATCTGATGGCGAGACGATTCGCTT GCGCCGCTATCGTCACCGCAATGCGCCACGTGACAATCAGCCAGCTTTGGTGTTTTACCACGGTGGCGGTTATGTTGGTG GTTCGCTCAACTCTCACGACTTGGTCTGTCAGCATCTGGCCAATGGCGGCGAGTGTACGGTCATTGCTGTCGATTACCGT CTGGCGCCTGAATACCCCTATCCTACGCCTGTTAACGATGGGTTAACTGCTTATCGCTATATTGCCAGTCATGCGGATAA ATTCGGGATTGATGCCAATCGTTTGGCAGTCGGTGGTGACAGTGCAGGCGGTAACTTGGCGGCAGTGGTGGCACAGCAAA CCAAAAATGACACGCATCCGCCCAAGCTGCAATTATTATGGGTGCCTTGGGTCGATATGAGCGGTGAGCATGAGTCCTAT GAGCTGTTTGCCACAGGCTTTTTGTTAGAGCAAGCTCAGATGCGCTGGTACACCCATCACTATTTGGGTGATACAGATAA GATTGATACCACAGACCCTATGGTCTCCCCTATATATGGTGACCTGCAAGGCGTGGCACCTGCGGTGGTCATGGTGGCAG GCTTTGACCCACTGCGTGATGAGGGTGTTGAGTATGCCAATAAATTAACAGCAGCAGGTGTCGATACCACGCTTAAAGTG TATGACAGCATGCCGCATCTGTTTATGCTTTATGCTGGTGAAATTGATGCCGCCAAAGTGGCTTTTGAGGATGCGGTACA AGCACTAAAGCGGTTATAA
Upstream 100 bases:
>100_bases GTGGTGACTTATAGAGCACTTTTGTTTACACCGCCCATCATCTGATATGGTATTAAAAAATATCCCGTTGCATCGTTTTA AATTAAAAAAGAGGCGTTGA
Downstream 100 bases:
>100_bases AGCACATAACACCTCTGCTTTTACCACTGGGTTTGTAATCGTTGGTTAATTTTCCGAGCGTTTATATTGCAAAACAAAGC GTTATCCTCATCTATGAAGT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTIINKSNLHQLSTKTRNALMKSVVRLPTAAKQQIAGEPIVIDGQTFDLSLQVMLQLFGPPPNHLPSVTEARATIEAQSP VLSQTPLDDIIKDEFPLTVSDGETIRLRRYRHRNAPRDNQPALVFYHGGGYVGGSLNSHDLVCQHLANGGECTVIAVDYR LAPEYPYPTPVNDGLTAYRYIASHADKFGIDANRLAVGGDSAGGNLAAVVAQQTKNDTHPPKLQLLWVPWVDMSGEHESY ELFATGFLLEQAQMRWYTHHYLGDTDKIDTTDPMVSPIYGDLQGVAPAVVMVAGFDPLRDEGVEYANKLTAAGVDTTLKV YDSMPHLFMLYAGEIDAAKVAFEDAVQALKRL
Sequences:
>Translated_352_residues MTIINKSNLHQLSTKTRNALMKSVVRLPTAAKQQIAGEPIVIDGQTFDLSLQVMLQLFGPPPNHLPSVTEARATIEAQSP VLSQTPLDDIIKDEFPLTVSDGETIRLRRYRHRNAPRDNQPALVFYHGGGYVGGSLNSHDLVCQHLANGGECTVIAVDYR LAPEYPYPTPVNDGLTAYRYIASHADKFGIDANRLAVGGDSAGGNLAAVVAQQTKNDTHPPKLQLLWVPWVDMSGEHESY ELFATGFLLEQAQMRWYTHHYLGDTDKIDTTDPMVSPIYGDLQGVAPAVVMVAGFDPLRDEGVEYANKLTAAGVDTTLKV YDSMPHLFMLYAGEIDAAKVAFEDAVQALKRL >Mature_351_residues TIINKSNLHQLSTKTRNALMKSVVRLPTAAKQQIAGEPIVIDGQTFDLSLQVMLQLFGPPPNHLPSVTEARATIEAQSPV LSQTPLDDIIKDEFPLTVSDGETIRLRRYRHRNAPRDNQPALVFYHGGGYVGGSLNSHDLVCQHLANGGECTVIAVDYRL APEYPYPTPVNDGLTAYRYIASHADKFGIDANRLAVGGDSAGGNLAAVVAQQTKNDTHPPKLQLLWVPWVDMSGEHESYE LFATGFLLEQAQMRWYTHHYLGDTDKIDTTDPMVSPIYGDLQGVAPAVVMVAGFDPLRDEGVEYANKLTAAGVDTTLKVY DSMPHLFMLYAGEIDAAKVAFEDAVQALKRL
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=121, Percent_Identity=38.0165289256198, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI206597554, Length=156, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI68051721, Length=307, Percent_Identity=24.1042345276873, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI68299767, Length=125, Percent_Identity=34.4, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI21328446, Length=101, Percent_Identity=36.6336633663366, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI226423947, Length=312, Percent_Identity=23.3974358974359, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI61966717, Length=136, Percent_Identity=28.6764705882353, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI157041237, Length=89, Percent_Identity=35.9550561797753, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1786682, Length=238, Percent_Identity=29.8319327731092, Blast_Score=101, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17567059, Length=264, Percent_Identity=29.1666666666667, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI72001146, Length=408, Percent_Identity=24.5098039215686, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540028, Length=170, Percent_Identity=30.5882352941176, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71996133, Length=141, Percent_Identity=32.6241134751773, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115533410, Length=108, Percent_Identity=36.1111111111111, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI115533412, Length=108, Percent_Identity=36.1111111111111, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24656084, Length=104, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24656076, Length=104, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20130169, Length=104, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 38599; Mature: 38468
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIINKSNLHQLSTKTRNALMKSVVRLPTAAKQQIAGEPIVIDGQTFDLSLQVMLQLFGP CEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEECHHHHHHHHHHCC PPNHLPSVTEARATIEAQSPVLSQTPLDDIIKDEFPLTVSDGETIRLRRYRHRNAPRDNQ CCCCCCCHHHHHHEEECCCCCCCCCCHHHHHHCCCCEEECCCCEEEEEHHHHCCCCCCCC PALVFYHGGGYVGGSLNSHDLVCQHLANGGECTVIAVDYRLAPEYPYPTPVNDGLTAYRY CEEEEECCCEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHH IASHADKFGIDANRLAVGGDSAGGNLAAVVAQQTKNDTHPPKLQLLWVPWVDMSGEHESY HHHCCHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCE ELFATGFLLEQAQMRWYTHHYLGDTDKIDTTDPMVSPIYGDLQGVAPAVVMVAGFDPLRD EEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCHHH EGVEYANKLTAAGVDTTLKVYDSMPHLFMLYAGEIDAAKVAFEDAVQALKRL HHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TIINKSNLHQLSTKTRNALMKSVVRLPTAAKQQIAGEPIVIDGQTFDLSLQVMLQLFGP EECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEECHHHHHHHHHHCC PPNHLPSVTEARATIEAQSPVLSQTPLDDIIKDEFPLTVSDGETIRLRRYRHRNAPRDNQ CCCCCCCHHHHHHEEECCCCCCCCCCHHHHHHCCCCEEECCCCEEEEEHHHHCCCCCCCC PALVFYHGGGYVGGSLNSHDLVCQHLANGGECTVIAVDYRLAPEYPYPTPVNDGLTAYRY CEEEEECCCEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHH IASHADKFGIDANRLAVGGDSAGGNLAAVVAQQTKNDTHPPKLQLLWVPWVDMSGEHESY HHHCCHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCE ELFATGFLLEQAQMRWYTHHYLGDTDKIDTTDPMVSPIYGDLQGVAPAVVMVAGFDPLRD EEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCHHH EGVEYANKLTAAGVDTTLKVYDSMPHLFMLYAGEIDAAKVAFEDAVQALKRL HHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]