| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ybeZ [H]
Identifier: 148653767
GI number: 148653767
Start: 2455031
End: 2456170
Strand: Direct
Name: ybeZ [H]
Synonym: PsycPRwf_1970
Alternate gene names: 148653767
Gene position: 2455031-2456170 (Clockwise)
Preceding gene: 148653763
Following gene: 148653768
Centisome position: 82.41
GC content: 46.23
Gene sequence:
>1140_bases TTGACTGATACTGTAACTCGCAAAGTAAACCTAGATTTTTTAACCTCACCTCAACTCAAGGTTTTGGTAGGCGAATACAA CAACCATTTAAAGTACATCCAAGATCGTTTGGGTATTACTATCAATCAGCGCCAAAACAAGTTTACCTTAGCCGGTGATT TAACAGCAGTGGAGCGTGGCGATTACATCTTAAATAAACTGGCCGATGAGGCGCAAAGTGCCGATGACATCACTCCAGAA GAGCTGCATTTAATCATTCAATCTAGCTTATCTCGTAACTTTGAAGGCGCAGTAAGCGTGAGTGAAGCTGACACCAAATC TGGTTATAGCGAAGGCGACAGCTATCAGCGTCCAAGCTATGAGTACGATGCCGAGGCCAACTACGACAGCATTGCGCTAC GTACCCGCAAAGGCAAAATTATTCCCCGTGGCGGCAATCAGCAGCAATACGTTAAGCGTATCTTGACCTCAGATGTGTCT TTTGGCGTTGGCCCTGCCGGTACGGGTAAAACCTATCTGGCGGTTGCCTGTGCCGTTGATATGTTAGAGCGTAATGAGAT TGAGCGTATCTTACTGGTGCGCCCTGCGGTTGAAGCGGGCGAAAAACTCGGCTTCTTACCTGGCGACTTAACCCAGAAGA TTGACCCTTATTTGCGTCCTTTGTATGATGCGCTTTATGAAATGCTCGGCTTTGAAAAAGTAGGCAAATTAATTGAGAAG CAGATCATTGAAGTGGCGCCTTTAGCCTACATGCGTGGCCGCACCTTAAACAACTCATTTGTTATTCTTGATGAGGCACA AAACACCACGCCTGAACAGATGAAAATGTTCTTGACCCGTTTAGGCTTTGGCTCACGTGCGGTGATTACAGGTGATGTGA CGCAGGTAGATTTGCCGCGCGGCCATAAGTCAGGTCTGGCTCAAGCACTACAAATCTTAAGCAATATTGATGAGATTCAT ATCACTAAGTTTGACTCAAAAGATGTGGTACGCCATCAACTGGTACAGAAGATTGTTGAAGCTTACGGCGAGTTTGATGA AGAGCAAGAAGCCTTAAAAGAGGCGCGCAAACAAGCACGTATCGCGGAACAAGAGCGTAAGCAAATTGATGCTGAGCTTG GGTCCGGCTCTCAGTCTTAA
Upstream 100 bases:
>100_bases TTACACTTAGCGGATGGCAAAGACTGGCCATCTGACACCACAAAACACAGTCGTAAAACAAAAACCTGATAACCATACTT CATAAAAAAAGGATCATCAC
Downstream 100 bases:
>100_bases CTGCCTTTAAGACTGGCCTATCTTAATTGGCTATCATTTAAAAAGCTGGGTATGATATCCAGCTTTTTTATTTGTCCGCA TTACTTAGCTGTTTTACCAC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTDTVTRKVNLDFLTSPQLKVLVGEYNNHLKYIQDRLGITINQRQNKFTLAGDLTAVERGDYILNKLADEAQSADDITPE ELHLIIQSSLSRNFEGAVSVSEADTKSGYSEGDSYQRPSYEYDAEANYDSIALRTRKGKIIPRGGNQQQYVKRILTSDVS FGVGPAGTGKTYLAVACAVDMLERNEIERILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVGKLIEK QIIEVAPLAYMRGRTLNNSFVILDEAQNTTPEQMKMFLTRLGFGSRAVITGDVTQVDLPRGHKSGLAQALQILSNIDEIH ITKFDSKDVVRHQLVQKIVEAYGEFDEEQEALKEARKQARIAEQERKQIDAELGSGSQS
Sequences:
>Translated_379_residues MTDTVTRKVNLDFLTSPQLKVLVGEYNNHLKYIQDRLGITINQRQNKFTLAGDLTAVERGDYILNKLADEAQSADDITPE ELHLIIQSSLSRNFEGAVSVSEADTKSGYSEGDSYQRPSYEYDAEANYDSIALRTRKGKIIPRGGNQQQYVKRILTSDVS FGVGPAGTGKTYLAVACAVDMLERNEIERILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVGKLIEK QIIEVAPLAYMRGRTLNNSFVILDEAQNTTPEQMKMFLTRLGFGSRAVITGDVTQVDLPRGHKSGLAQALQILSNIDEIH ITKFDSKDVVRHQLVQKIVEAYGEFDEEQEALKEARKQARIAEQERKQIDAELGSGSQS >Mature_378_residues TDTVTRKVNLDFLTSPQLKVLVGEYNNHLKYIQDRLGITINQRQNKFTLAGDLTAVERGDYILNKLADEAQSADDITPEE LHLIIQSSLSRNFEGAVSVSEADTKSGYSEGDSYQRPSYEYDAEANYDSIALRTRKGKIIPRGGNQQQYVKRILTSDVSF GVGPAGTGKTYLAVACAVDMLERNEIERILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVGKLIEKQ IIEVAPLAYMRGRTLNNSFVILDEAQNTTPEQMKMFLTRLGFGSRAVITGDVTQVDLPRGHKSGLAQALQILSNIDEIHI TKFDSKDVVRHQLVQKIVEAYGEFDEEQEALKEARKQARIAEQERKQIDAELGSGSQS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=367, Percent_Identity=52.3160762942779, Blast_Score=345, Evalue=3e-96, Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=45.3658536585366, Blast_Score=192, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 42351; Mature: 42220
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTVTRKVNLDFLTSPQLKVLVGEYNNHLKYIQDRLGITINQRQNKFTLAGDLTAVERG CCCCCEEEEECEEECCCCEEEEECCCCCHHHHHHHHHCEEEECCCCEEEEECCCHHHHCC DYILNKLADEAQSADDITPEELHLIIQSSLSRNFEGAVSVSEADTKSGYSEGDSYQRPSY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCC EYDAEANYDSIALRTRKGKIIPRGGNQQQYVKRILTSDVSFGVGPAGTGKTYLAVACAVD CCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH MLERNEIERILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVGKLIEK HHHHHCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QIIEVAPLAYMRGRTLNNSFVILDEAQNTTPEQMKMFLTRLGFGSRAVITGDVTQVDLPR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCC GHKSGLAQALQILSNIDEIHITKFDSKDVVRHQLVQKIVEAYGEFDEEQEALKEARKQAR CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAEQERKQIDAELGSGSQS HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDTVTRKVNLDFLTSPQLKVLVGEYNNHLKYIQDRLGITINQRQNKFTLAGDLTAVERG CCCCEEEEECEEECCCCEEEEECCCCCHHHHHHHHHCEEEECCCCEEEEECCCHHHHCC DYILNKLADEAQSADDITPEELHLIIQSSLSRNFEGAVSVSEADTKSGYSEGDSYQRPSY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCC EYDAEANYDSIALRTRKGKIIPRGGNQQQYVKRILTSDVSFGVGPAGTGKTYLAVACAVD CCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH MLERNEIERILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVGKLIEK HHHHHCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QIIEVAPLAYMRGRTLNNSFVILDEAQNTTPEQMKMFLTRLGFGSRAVITGDVTQVDLPR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCC GHKSGLAQALQILSNIDEIHITKFDSKDVVRHQLVQKIVEAYGEFDEEQEALKEARKQAR CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAEQERKQIDAELGSGSQS HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]