| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is nadA [H]
Identifier: 148653761
GI number: 148653761
Start: 2446999
End: 2448186
Strand: Direct
Name: nadA [H]
Synonym: PsycPRwf_1964
Alternate gene names: 148653761
Gene position: 2446999-2448186 (Clockwise)
Preceding gene: 148653757
Following gene: 148653762
Centisome position: 82.14
GC content: 49.24
Gene sequence:
>1188_bases ATGACTACCTCACAAGCCAGCTCGTACACGCCCGCTGAGAAGACTGAGATTTTTGCTTATGACGCGCCAACTTTGGCCCA AAGCAACCAGTCTTCTGCCATTCAAAGCATTGATATCGACTATGCCAAAGCTAAGATACCCGCTGAGCTGTCTCGTACTG AGCGCCTGCAAGTGGTAGAAAACATTAAGCGCCTGCTAAAACAGCACAATGCGGTACTGGTGGCGCATTATTATGTCGAC CCCTACATTCAGGACTTAGCCTTAGAGACCGGCGGCTGTGTGGGAGACTCCTTAGAGATGGCGCGTTTTGGTAAAGAACA TGAGGCGCAAACCTTGGTGGTGGCCGGCGTAAGGTTTATGGGGGAGTCTGCCAAAATTCTGAGTATGGAAAAAACCGTAC TTATGGCAGATCTTGAAGCTGAGTGTTCGCTGGATTTGGGCTGCCCTATAGACGAGTTTAGTGCATTTTGTGATCAGCAT CCCGACCGCACTGTGGTGGTCTATGCCAACACCAGCGCAGAAGTCAAAGCACGTGCAGATTGGGTGGTGACCTCATCTGT AGGTCTTGAGATTGTGACTCATCTGCATGAACAGGGTCGAAAAATAATCTGGGGACCAGACCGTCATTTGGGTAAATACA TTCAAAAACAGACCGGTGCTGACATGCTGCTGTGGCAAGGCTCGTGTATTGTACATAACGAATTTAAAGCACGTGAACTT GAGCAATTAAAAGCACAATACCCTGAGGCTGTGGTGCTGGTTCATCCGGAGTCTCCTGATAGCGTGGTGGCTTTGGCCGA TGTGGTGGGCTCAACCAGCAAGCTATTAAACGCCACCAAAGAGATGGATAACCAAACCTTTATCGTGGGCACTGACCTTG GCATCTTACATGAGATGCAAAAGCACTCACCAGATAAGCTGTTTTTGGCAGCCCCTACTGCTGGTGAAAGCGCAACTTGT AAGAGCTGTGCGTTTTGCCCTTGGATGGCCATGAATGGTCTAAAAGGTATCGAAAACTGTCTACAGACTGGCAGTGGCGA GATTAAATTAGCGCCCGAATTGGCACAGGCGGCTTTAAAGCCACTACAGCGTATGTTGGATTTCGCCGCTGAGCAAAAAC GTCGTGTGGCCACCAGTGGCGATATTATTGAAGACCGTGCGTTATTTGCAAACGTTGGCCCAGCTTAA
Upstream 100 bases:
>100_bases CTCAAAATGAGCATAATTATAGCCATCGCTTTATTATTTGCTTATCAAGTTTTGATTAATTAAGTGCCGCCTTTAGAGCA CACAATGACAGGGATTTTTT
Downstream 100 bases:
>100_bases GTTTTCGCTATATTAAGCTGCTGCTGGCAGGCTAAATGTAGTCCCCATAACACCTTTTAACCAGAGAGCACCCTATGCCA ACTTATTCAGTGGATAACGC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTTSQASSYTPAEKTEIFAYDAPTLAQSNQSSAIQSIDIDYAKAKIPAELSRTERLQVVENIKRLLKQHNAVLVAHYYVD PYIQDLALETGGCVGDSLEMARFGKEHEAQTLVVAGVRFMGESAKILSMEKTVLMADLEAECSLDLGCPIDEFSAFCDQH PDRTVVVYANTSAEVKARADWVVTSSVGLEIVTHLHEQGRKIIWGPDRHLGKYIQKQTGADMLLWQGSCIVHNEFKAREL EQLKAQYPEAVVLVHPESPDSVVALADVVGSTSKLLNATKEMDNQTFIVGTDLGILHEMQKHSPDKLFLAAPTAGESATC KSCAFCPWMAMNGLKGIENCLQTGSGEIKLAPELAQAALKPLQRMLDFAAEQKRRVATSGDIIEDRALFANVGPA
Sequences:
>Translated_395_residues MTTSQASSYTPAEKTEIFAYDAPTLAQSNQSSAIQSIDIDYAKAKIPAELSRTERLQVVENIKRLLKQHNAVLVAHYYVD PYIQDLALETGGCVGDSLEMARFGKEHEAQTLVVAGVRFMGESAKILSMEKTVLMADLEAECSLDLGCPIDEFSAFCDQH PDRTVVVYANTSAEVKARADWVVTSSVGLEIVTHLHEQGRKIIWGPDRHLGKYIQKQTGADMLLWQGSCIVHNEFKAREL EQLKAQYPEAVVLVHPESPDSVVALADVVGSTSKLLNATKEMDNQTFIVGTDLGILHEMQKHSPDKLFLAAPTAGESATC KSCAFCPWMAMNGLKGIENCLQTGSGEIKLAPELAQAALKPLQRMLDFAAEQKRRVATSGDIIEDRALFANVGPA >Mature_394_residues TTSQASSYTPAEKTEIFAYDAPTLAQSNQSSAIQSIDIDYAKAKIPAELSRTERLQVVENIKRLLKQHNAVLVAHYYVDP YIQDLALETGGCVGDSLEMARFGKEHEAQTLVVAGVRFMGESAKILSMEKTVLMADLEAECSLDLGCPIDEFSAFCDQHP DRTVVVYANTSAEVKARADWVVTSSVGLEIVTHLHEQGRKIIWGPDRHLGKYIQKQTGADMLLWQGSCIVHNEFKARELE QLKAQYPEAVVLVHPESPDSVVALADVVGSTSKLLNATKEMDNQTFIVGTDLGILHEMQKHSPDKLFLAAPTAGESATCK SCAFCPWMAMNGLKGIENCLQTGSGEIKLAPELAQAALKPLQRMLDFAAEQKRRVATSGDIIEDRALFANVGPA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=326, Percent_Identity=64.7239263803681, Blast_Score=445, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 43165; Mature: 43033
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSQASSYTPAEKTEIFAYDAPTLAQSNQSSAIQSIDIDYAKAKIPAELSRTERLQVVE CCCCCCCCCCCCCCCEEEEECCCCHHCCCCCHHHHEECCCHHHHCCCHHHHHHHHHHHHH NIKRLLKQHNAVLVAHYYVDPYIQDLALETGGCVGDSLEMARFGKEHEAQTLVVAGVRFM HHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEHHHHC GESAKILSMEKTVLMADLEAECSLDLGCPIDEFSAFCDQHPDRTVVVYANTSAEVKARAD CCCCCEEEHHHEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECC WVVTSSVGLEIVTHLHEQGRKIIWGPDRHLGKYIQKQTGADMLLWQGSCIVHNEFKAREL EEEECHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCHHHHHH EQLKAQYPEAVVLVHPESPDSVVALADVVGSTSKLLNATKEMDNQTFIVGTDLGILHEMQ HHHHHHCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHHHHHH KHSPDKLFLAAPTAGESATCKSCAFCPWMAMNGLKGIENCLQTGSGEIKLAPELAQAALK HCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH PLQRMLDFAAEQKRRVATSGDIIEDRALFANVGPA HHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCCCC >Mature Secondary Structure TTSQASSYTPAEKTEIFAYDAPTLAQSNQSSAIQSIDIDYAKAKIPAELSRTERLQVVE CCCCCCCCCCCCCCEEEEECCCCHHCCCCCHHHHEECCCHHHHCCCHHHHHHHHHHHHH NIKRLLKQHNAVLVAHYYVDPYIQDLALETGGCVGDSLEMARFGKEHEAQTLVVAGVRFM HHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEHHHHC GESAKILSMEKTVLMADLEAECSLDLGCPIDEFSAFCDQHPDRTVVVYANTSAEVKARAD CCCCCEEEHHHEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECC WVVTSSVGLEIVTHLHEQGRKIIWGPDRHLGKYIQKQTGADMLLWQGSCIVHNEFKAREL EEEECHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCHHHHHH EQLKAQYPEAVVLVHPESPDSVVALADVVGSTSKLLNATKEMDNQTFIVGTDLGILHEMQ HHHHHHCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHHHHHH KHSPDKLFLAAPTAGESATCKSCAFCPWMAMNGLKGIENCLQTGSGEIKLAPELAQAALK HCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH PLQRMLDFAAEQKRRVATSGDIIEDRALFANVGPA HHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA