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The map label for this gene is yggA [C]

Identifier: 148653757

GI number: 148653757

Start: 2442694

End: 2443287

Strand: Direct

Name: yggA [C]

Synonym: PsycPRwf_1960

Alternate gene names: 148653757

Gene position: 2442694-2443287 (Clockwise)

Preceding gene: 148653754

Following gene: 148653761

Centisome position: 82.0

GC content: 45.45

Gene sequence:

>594_bases
ATGGATTATGTATCAGGCTTTGCGCTCGGCTTATCACTCATCTTCGCCATTGGCTCCCAAAATGCCTTTATCTTAAAGCA
AGGTCTAAAAAAGCAGCACGTGTTTGCCGTATGCCTGTTTTGTGCCCTATCAGATGCGCTTCTCATCTCGGCAGGGGTTG
CAGGATTTGGCGCCATGACGGCACAACATCCCAAGATTGTGAATATTGCGAAGCTTGCTGGGGCTTTATTTTTATTAGTA
TATGGTCTGCAAAGCTTATATGCAGGCTTTACCAAGTCGCATGCCTTAGGCAGTAATGCCGCCGCCGAAAGCAGCTTAAA
TAGATCGCTTATGCTGTGTTTTGGGTTTACCTGGCTTAATCCACACGTGTATTTAGATACCTTGGTGCTGGTCGGTATGG
TGTCTACTGGTGCCAATAGTAAGCTACTATTTGCCACCGGTGCGGTGAGTGCTTCTTTTGTGTTTTTCTTCAGCTTAGGG
TATGGCGCGCGCCTACTCGGCCCACTGTTTGCCAAGCCTAAATCTTGGAATATTTTAGATGCTTTAGTGGGCGTATTAAT
GCTTTATTTATCTTGGCATCTATACAACAGTTAA

Upstream 100 bases:

>100_bases
TAAAACAAGACAGATGGCAAAGCCGCTGCTGTTGATGGGTGTAAATCACTCATATTGTAAGCTATGGCTCTATTTTAATA
ATTTACCATGAGATAACCAG

Downstream 100 bases:

>100_bases
TCTAAATCTGCGCCAAATTAGAGCGATGTTTGAGCAGTTGTCCAGTTAGACTAAGCCTGATAAAAAAGCCCCTGCTGATG
AACTGACCCCCAAATCTTGG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDYVSGFALGLSLIFAIGSQNAFILKQGLKKQHVFAVCLFCALSDALLISAGVAGFGAMTAQHPKIVNIAKLAGALFLLV
YGLQSLYAGFTKSHALGSNAAAESSLNRSLMLCFGFTWLNPHVYLDTLVLVGMVSTGANSKLLFATGAVSASFVFFFSLG
YGARLLGPLFAKPKSWNILDALVGVLMLYLSWHLYNS

Sequences:

>Translated_197_residues
MDYVSGFALGLSLIFAIGSQNAFILKQGLKKQHVFAVCLFCALSDALLISAGVAGFGAMTAQHPKIVNIAKLAGALFLLV
YGLQSLYAGFTKSHALGSNAAAESSLNRSLMLCFGFTWLNPHVYLDTLVLVGMVSTGANSKLLFATGAVSASFVFFFSLG
YGARLLGPLFAKPKSWNILDALVGVLMLYLSWHLYNS
>Mature_197_residues
MDYVSGFALGLSLIFAIGSQNAFILKQGLKKQHVFAVCLFCALSDALLISAGVAGFGAMTAQHPKIVNIAKLAGALFLLV
YGLQSLYAGFTKSHALGSNAAAESSLNRSLMLCFGFTWLNPHVYLDTLVLVGMVSTGANSKLLFATGAVSASFVFFFSLG
YGARLLGPLFAKPKSWNILDALVGVLMLYLSWHLYNS

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=194, Percent_Identity=35.0515463917526, Blast_Score=118, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20985; Mature: 20985

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYVSGFALGLSLIFAIGSQNAFILKQGLKKQHVFAVCLFCALSDALLISAGVAGFGAMT
CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
AQHPKIVNIAKLAGALFLLVYGLQSLYAGFTKSHALGSNAAAESSLNRSLMLCFGFTWLN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEHHHCC
PHVYLDTLVLVGMVSTGANSKLLFATGAVSASFVFFFSLGYGARLLGPLFAKPKSWNILD
CHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
ALVGVLMLYLSWHLYNS
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDYVSGFALGLSLIFAIGSQNAFILKQGLKKQHVFAVCLFCALSDALLISAGVAGFGAMT
CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
AQHPKIVNIAKLAGALFLLVYGLQSLYAGFTKSHALGSNAAAESSLNRSLMLCFGFTWLN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEHHHCC
PHVYLDTLVLVGMVSTGANSKLLFATGAVSASFVFFFSLGYGARLLGPLFAKPKSWNILD
CHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
ALVGVLMLYLSWHLYNS
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]