| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is bcp [H]
Identifier: 148653565
GI number: 148653565
Start: 2188141
End: 2188635
Strand: Direct
Name: bcp [H]
Synonym: PsycPRwf_1768
Alternate gene names: 148653565
Gene position: 2188141-2188635 (Clockwise)
Preceding gene: 148653564
Following gene: 148653566
Centisome position: 73.45
GC content: 42.02
Gene sequence:
>495_bases ATGGCCAAACCCACTGACGAAATGATTACCCTACCTAACTTCCCAATGCCTATGGTACAAAGCATAGATGATGACATGGT AGAGAGCGAAATAGTACTTGATCAGTTTGTTGAGAATATGGACAAAGGCTTAATTATTTACTTCTATCCACGTGATAATA CGCCCGGATGTACCACTCAGGCGACTGACTTTACCGCCAAGCTTAGTGAATTTGATGCGCTTGGCTACGAGGTTATCGGG GTGTCTAGAGACAGTATTGAATCGCATAAGAAATTTATCGAAAAACACCATCTTCAAATTGCGCTCATCAGTGATACAGA TGAAAAGCTTTGCCAGCACTTCGATGTGATTAAAGAAAAAAATATGTATGGCAAAAAAACTCTAGGCCTGGTGCGCTCTG CTTTTGTGTTTGATAAAAATGGCACACTGACCCACGCTCAGCGTAATTTGCGTGCCAAGGACTATGCCGATAGACTTCTT GACACCTTATCGTAA
Upstream 100 bases:
>100_bases CATTACTCAATCTTAGGTAAACTACTCTAAAAACAATAACTGCCTTTTAGATTAATAAATGTAGATGAATAAATTCATTT AAGTAAATAAGGAAAACAAA
Downstream 100 bases:
>100_bases TGGTTATCTTAAATACCTTGTTTAAGCACAATGCAGTCTTTATAAAAATCTAAGGTATTACCTGTGTTTGCGGCATAGCC TCCATAAATTATTTATAACC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAKPTDEMITLPNFPMPMVQSIDDDMVESEIVLDQFVENMDKGLIIYFYPRDNTPGCTTQATDFTAKLSEFDALGYEVIG VSRDSIESHKKFIEKHHLQIALISDTDEKLCQHFDVIKEKNMYGKKTLGLVRSAFVFDKNGTLTHAQRNLRAKDYADRLL DTLS
Sequences:
>Translated_164_residues MAKPTDEMITLPNFPMPMVQSIDDDMVESEIVLDQFVENMDKGLIIYFYPRDNTPGCTTQATDFTAKLSEFDALGYEVIG VSRDSIESHKKFIEKHHLQIALISDTDEKLCQHFDVIKEKNMYGKKTLGLVRSAFVFDKNGTLTHAQRNLRAKDYADRLL DTLS >Mature_163_residues AKPTDEMITLPNFPMPMVQSIDDDMVESEIVLDQFVENMDKGLIIYFYPRDNTPGCTTQATDFTAKLSEFDALGYEVIGV SRDSIESHKKFIEKHHLQIALISDTDEKLCQHFDVIKEKNMYGKKTLGLVRSAFVFDKNGTLTHAQRNLRAKDYADRLLD TLS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=120, Percent_Identity=35, Blast_Score=90, Evalue=6e-20,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18727; Mature: 18595
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPTDEMITLPNFPMPMVQSIDDDMVESEIVLDQFVENMDKGLIIYFYPRDNTPGCTTQ CCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC ATDFTAKLSEFDALGYEVIGVSRDSIESHKKFIEKHHLQIALISDTDEKLCQHFDVIKEK CCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHC NMYGKKTLGLVRSAFVFDKNGTLTHAQRNLRAKDYADRLLDTLS CCCCHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure AKPTDEMITLPNFPMPMVQSIDDDMVESEIVLDQFVENMDKGLIIYFYPRDNTPGCTTQ CCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC ATDFTAKLSEFDALGYEVIGVSRDSIESHKKFIEKHHLQIALISDTDEKLCQHFDVIKEK CCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHC NMYGKKTLGLVRSAFVFDKNGTLTHAQRNLRAKDYADRLLDTLS CCCCHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]