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The map label for this gene is tolR [H]

Identifier: 148653365

GI number: 148653365

Start: 1924389

End: 1924838

Strand: Direct

Name: tolR [H]

Synonym: PsycPRwf_1567

Alternate gene names: 148653365

Gene position: 1924389-1924838 (Clockwise)

Preceding gene: 148653364

Following gene: 148653366

Centisome position: 64.6

GC content: 47.78

Gene sequence:

>450_bases
ATGAAAGCCAGCCCCTTTTCTCGCCATAAAAAAGAGCTCAATGCCAGCATGAACGTCGTGCCTTATATCGATGTGATGCT
GGTGCTTTTGGTTATATTTATGGTGACCACGCCCATGCTCACCACCGGCGTCGATGTGGACTTGCCAAAAGCCAGTACTG
AGAATATCGCGACTGGCGCTCAAATGCCGGTGATCGTCTCCCTAAAAAGCAATGGGGAGATTTTTATGAGCTTTGAAAAC
GACATTGATATGCCCGTCTCAGAGCAAGAACTGATTGATACCTTGGTGCGTCTGCAAGCTCAAGCGGGCGGCGATCAAGT
AAAAGTAATGATTAATGCCGATCAAAACAATCAATACGGTATGATCATGCAGCTGATGGCCAATTTGCAACAAGCGGGGG
TCGAAAAAGTGGGCCTATTAACCGCTCAACCGCTGCCCTCTAGACCTTAA

Upstream 100 bases:

>100_bases
TGAAACCTATGAGACCGGCGCAGCGCCTGTCGCAAGCTCAAACGACGTACCCACAGCGGCTCAAAATATTCAATCCCCTT
TGGTATAAAAGGAGCATTTT

Downstream 100 bases:

>100_bases
GGCTCAGATAAAGCCTTTATAAGTTTTAAGCTTGCGAGCCAATAATCCCTATCCGCTTTATTTTTATTTAATTTGAGATG
ATATCCGTGCTAAATCGTGC

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKASPFSRHKKELNASMNVVPYIDVMLVLLVIFMVTTPMLTTGVDVDLPKASTENIATGAQMPVIVSLKSNGEIFMSFEN
DIDMPVSEQELIDTLVRLQAQAGGDQVKVMINADQNNQYGMIMQLMANLQQAGVEKVGLLTAQPLPSRP

Sequences:

>Translated_149_residues
MKASPFSRHKKELNASMNVVPYIDVMLVLLVIFMVTTPMLTTGVDVDLPKASTENIATGAQMPVIVSLKSNGEIFMSFEN
DIDMPVSEQELIDTLVRLQAQAGGDQVKVMINADQNNQYGMIMQLMANLQQAGVEKVGLLTAQPLPSRP
>Mature_149_residues
MKASPFSRHKKELNASMNVVPYIDVMLVLLVIFMVTTPMLTTGVDVDLPKASTENIATGAQMPVIVSLKSNGEIFMSFEN
DIDMPVSEQELIDTLVRLQAQAGGDQVKVMINADQNNQYGMIMQLMANLQQAGVEKVGLLTAQPLPSRP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=124, Percent_Identity=39.5161290322581, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16278; Mature: 16278

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASPFSRHKKELNASMNVVPYIDVMLVLLVIFMVTTPMLTTGVDVDLPKASTENIATGA
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
QMPVIVSLKSNGEIFMSFENDIDMPVSEQELIDTLVRLQAQAGGDQVKVMINADQNNQYG
CCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH
MIMQLMANLQQAGVEKVGLLTAQPLPSRP
HHHHHHHHHHHCCHHHHCEEECCCCCCCC
>Mature Secondary Structure
MKASPFSRHKKELNASMNVVPYIDVMLVLLVIFMVTTPMLTTGVDVDLPKASTENIATGA
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
QMPVIVSLKSNGEIFMSFENDIDMPVSEQELIDTLVRLQAQAGGDQVKVMINADQNNQYG
CCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH
MIMQLMANLQQAGVEKVGLLTAQPLPSRP
HHHHHHHHHHHCCHHHHCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]