Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148653366

Identifier: 148653366

GI number: 148653366

Start: 1924916

End: 1925806

Strand: Direct

Name: 148653366

Synonym: PsycPRwf_1568

Alternate gene names: NA

Gene position: 1924916-1925806 (Clockwise)

Preceding gene: 148653365

Following gene: 148653367

Centisome position: 64.62

GC content: 52.19

Gene sequence:

>891_bases
ATGATATCCGTGCTAAATCGTGCGCCCAGTGTTTATATCCCTGTAGAGCCTGAAGATAACGGCATCTTATTGCCGGCCAT
CTTGAGCCTAATCGTGCATGGCTCGATATTGGCCCTTATTATCTTTTTGCACCGCATTCCTCAGCTAGAGACGACACCTA
GCATAGAGACCAGTATTGTCACCCCCGAAGAGTTGGCGGCCATGCAAGCAGAAGTGCGCGCCAATCGTGACAACATGATG
GCCTCAGGCGTGCCGGTTACCCCCGAGTTTAGCCCCCAGTCAGTGCCAGAGTCTACGCACACCGCAGAGCTAAGCCATGA
GTCAACTTTCTCTAAGATGTCCTCATTTTTTCGCAATGAGCCACTCCCTGAGCCTATGCCTCAAAGCAGCGTAAGCTCGG
AGCCTGAGCTAAGCGAGCCATTAGAGGCACCTGATATCACGCAGCCTGATGATTTAACCGACTTTGCTGGCGAACAAAAT
CCACTAAGCTCTCAGCCTACAAGTCCCCCCCCCAAAGTAAAAGCCAATAGCCAAGATTCAGGTCAAGTGGCCGCCACCTT
TGCCTCAGGGGCTGAAGGCTCAAGCACTAAGTCAACTGCCGCAAGTGGTTCGGCCACAGGTAGTAGCAATAAAGTCAGCA
GTGGCGATATCAGTGGGGCTTTAGTCGGTATGATTAAGCCCTTGTGGAACCCTCCTGTAGGACGTGTAGGTACTCGGGTA
TCCGTATCAGTGACCGTCGATGCCAATGGCAGCGTTCAGAGCGTTAATGCCAACACCTCAGATGAGGCGCTAAAACAATC
ACTTGAGTCGGCGATCCGTCAAGCCAGTCCCCTAACCCCTGTGGTCGGCACCAATACCCGTAGAATTAAGCTCAACTTCG
TGGTTGAATAG

Upstream 100 bases:

>100_bases
AACCGCTGCCCTCTAGACCTTAAGGCTCAGATAAAGCCTTTATAAGTTTTAAGCTTGCGAGCCAATAATCCCTATCCGCT
TTATTTTTATTTAATTTGAG

Downstream 100 bases:

>100_bases
CCTAGCAAGCAGCGCTAGTTACACGGCTGCCCTTTACATCCCAATCACGTCTTAATATGCTTTATTTCATTAAAATAACA
AAGATAGGACTTGTGTACTC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MISVLNRAPSVYIPVEPEDNGILLPAILSLIVHGSILALIIFLHRIPQLETTPSIETSIVTPEELAAMQAEVRANRDNMM
ASGVPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNEPLPEPMPQSSVSSEPELSEPLEAPDITQPDDLTDFAGEQN
PLSSQPTSPPPKVKANSQDSGQVAATFASGAEGSSTKSTAASGSATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGTRV
SVSVTVDANGSVQSVNANTSDEALKQSLESAIRQASPLTPVVGTNTRRIKLNFVVE

Sequences:

>Translated_296_residues
MISVLNRAPSVYIPVEPEDNGILLPAILSLIVHGSILALIIFLHRIPQLETTPSIETSIVTPEELAAMQAEVRANRDNMM
ASGVPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNEPLPEPMPQSSVSSEPELSEPLEAPDITQPDDLTDFAGEQN
PLSSQPTSPPPKVKANSQDSGQVAATFASGAEGSSTKSTAASGSATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGTRV
SVSVTVDANGSVQSVNANTSDEALKQSLESAIRQASPLTPVVGTNTRRIKLNFVVE
>Mature_296_residues
MISVLNRAPSVYIPVEPEDNGILLPAILSLIVHGSILALIIFLHRIPQLETTPSIETSIVTPEELAAMQAEVRANRDNMM
ASGVPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNEPLPEPMPQSSVSSEPELSEPLEAPDITQPDDLTDFAGEQN
PLSSQPTSPPPKVKANSQDSGQVAATFASGAEGSSTKSTAASGSATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGTRV
SVSVTVDANGSVQSVNANTSDEALKQSLESAIRQASPLTPVVGTNTRRIKLNFVVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31064; Mature: 31064

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVLNRAPSVYIPVEPEDNGILLPAILSLIVHGSILALIIFLHRIPQLETTPSIETSIV
CCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
TPEELAAMQAEVRANRDNMMASGVPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNE
CHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PLPEPMPQSSVSSEPELSEPLEAPDITQPDDLTDFAGEQNPLSSQPTSPPPKVKANSQDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GQVAATFASGAEGSSTKSTAASGSATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGTRV
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE
SVSVTVDANGSVQSVNANTSDEALKQSLESAIRQASPLTPVVGTNTRRIKLNFVVE
EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEEC
>Mature Secondary Structure
MISVLNRAPSVYIPVEPEDNGILLPAILSLIVHGSILALIIFLHRIPQLETTPSIETSIV
CCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
TPEELAAMQAEVRANRDNMMASGVPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNE
CHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PLPEPMPQSSVSSEPELSEPLEAPDITQPDDLTDFAGEQNPLSSQPTSPPPKVKANSQDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GQVAATFASGAEGSSTKSTAASGSATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGTRV
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE
SVSVTVDANGSVQSVNANTSDEALKQSLESAIRQASPLTPVVGTNTRRIKLNFVVE
EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA