| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is norB [H]
Identifier: 148653320
GI number: 148653320
Start: 1857063
End: 1859342
Strand: Direct
Name: norB [H]
Synonym: PsycPRwf_1520
Alternate gene names: 148653320
Gene position: 1857063-1859342 (Clockwise)
Preceding gene: 148653318
Following gene: 148653323
Centisome position: 62.34
GC content: 45.35
Gene sequence:
>2280_bases ATGGGCGAATATAAAAAGTATTGGTGGGGTTTAATCGCCATTCTGATTGTCACTTTTTCATTCTTAGGCTGGGGCGGTGT AGAGATTTATCGCACTGCACCCCCCATTCCAGAAAGATTTGTGGACAATCAAGGTCAGACGATAGTAACCAAAGACGATA TCATGGCCGGTCAATCTGCTTGGCAGCGTACGGGTGGCCAGCAGTTGGGCTCAGTATTAGGCCATGGGGCTTATCAGGCA CCAGACTGGACCGCAGACTGGCTGCATAGAGAGTTGGTAGCTTGGCGCAATATTAAGTCTAATGAGCTATACGCAGTAGA CTATGATGCGGCCACAGAAGATCAAAAAGCCGTATTAGATGCTCAGGTCAAAAAAGAATATCGCAGCAGTGCGGTAGATG AGCACAATACAGTGGTGCTTTCTAAGACCCGTATTGAGGCCATCAATCATATTGCACCGTATTATATGAGCGTCTATGGT GATGATCCAGAGTTTCAAAAAACACGTGAAAACTTTGCTATGAAAAACAACACCATCACCAGTGTTGAAGCGCGAGAAAA GTTAACCAATTTCTTCTTTTGGACCGCTTGGGTCGCCTCCGCTGAGCGCCCTGGCACTACCGCCACTTATACCAATAACT GGCCACATGAGCCTATTATTGGCAACAAACCCACCACAGAGAACCTAATGTGGTCGGTTGCCAGTGTGGTGTTCTTGATT GCTGGCGTGGGTTTACTGATTTGGGGCTGGGCCTTCTTACGTAAAGAGGACCATATTGAGCCTAAGCTGGTTACTCCAGA ATCAGACCCTCTTACCAAAATTCAACTCACCCCTTCTCAAAAAGCCTTGGCAAAATATGGCTTCTTGGTAGTGGCTTTGT TTATTTTTCAAGTATTTATCGGTGGCTTCGTCGCTCATTATACGGTCGAGGGTCAAAACTTCTATGGCATCCCTGTAGCT GACTACTTCCCCTACTCTTTAGTGCGTACTTGGCACATTCAATCCGCCCTATTTTGGATAGCCACAGCCTTCTTAATGGC CGGTTTATTCTTAACCCCAATCATTAATGGCGGTAAAGATCCTAAGTTCCAAAAGCTAGGCGTTGATGTACTGTGGGTGG CATTAATCATTGTTTGTGTGGGCTCTTTTATCAGTCAATACTTCTCCATCGCTGAAATCATGCCCGCCAAATATAACTTC TGGTTTGGCCATCAAGGCTATGAATTTATTGACTTGGGTCGTTTTTGGCAGATTCTAAAATGGGTGGGCATCTTAATCTG GTTGGTGCTTATGTCTCGCGGCATCTTGCCTGCCTTTAAGAACAAGGGCGATAACAACCTTTTGGCCATCTTCTTCGCCT CCGTGGTGTGTGTGGGTCTATTCTACGGCTCAGGCTTATCTTACGGCGAGCACACTCACTTGACCATCATGGAATACTGG CGCTGGTGGGTAGTTCACTTATGGGTTGAAGGCTTCTTTGAGGTATTCGCCACAGTATCATTGGCCTTTATTTTTTACAA TTTAGGCTTAGTGAACAAAAAAATTGCTACAGCATCCTCTATCGCTTCTGCAGCATTATTCTTACTAGGCGGTGTACCTG GGACCTTCCATCATTTATATTTTTCAGGTACCACAACCCCAATTATGGCCATTGGCGCCTCATTTAGTGCGCTAGAAGTG GTTCCTTTAATCGTGCTGGGTTATGAAGGCTATGAACACTGGTCTATGCAGCATAAATCGCCTTGGATGCATAAGCTAAA ATGGCCGATTATGTGCTTTGTGGCAGTGGCCTTTTGGAACATGCTTGGCGCAGGTGTCTTTGGATTTATGATTAACCCGC CGGTGTCTTTATTCTATTTGCAAGGCTTGAACACCACAGCAGTTCACTCACATGCAGCATTATTTGGGGTATATGGCTTC TTAGCACTCGGTTTTGTATTACTAGTCATGCGCTATATTCGCCCAGATTATGTCTTTAGTGATACGCTGATGAAAACAGG GTTTTGGCTGCTAAACTTGGGGTTGGTATTGATGATTGCCACAAGCTTACTGCCCATTGGTATTTTCCAGGCACATGCTT CAATCACCGAAGGTCTATGGTATGCGCGTAGCGAAGGCTTCTTACAACAAGATTTCCTAGTGACGCTAAGATGGATCCGC ACCTTTGGTGACGTCATCTTTATTACTGGTGCTGTCTGTGTGGCATTGCAGGTGGTTAAGCTAACCTTTGCCAAACCTTC ACATACCAACTATCAGCCTAATAGTCCTGTGAATAAGTAA
Upstream 100 bases:
>100_bases CCGCATGTTTTTATGGGGTCAACACAGATCCGTTGCTCTACCCATAAACATTCATTTTAAATGAATCTTATATTTATCTA GGTATATTCAGGAGTAAGAG
Downstream 100 bases:
>100_bases ATACAGGTGTAATGGACAAAATTCAGGCTAACACACCCAATCACAAAGCGCACTGTGAATCATGCACTCAGCCCCATAAG TTGAACACAGCTTATGGGGC
Product: nitric oxide reductase large subunit-like protein
Products: NA
Alternate protein names: NOR large subunit; Nitric oxide reductase cytochrome b subunit [H]
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MGEYKKYWWGLIAILIVTFSFLGWGGVEIYRTAPPIPERFVDNQGQTIVTKDDIMAGQSAWQRTGGQQLGSVLGHGAYQA PDWTADWLHRELVAWRNIKSNELYAVDYDAATEDQKAVLDAQVKKEYRSSAVDEHNTVVLSKTRIEAINHIAPYYMSVYG DDPEFQKTRENFAMKNNTITSVEAREKLTNFFFWTAWVASAERPGTTATYTNNWPHEPIIGNKPTTENLMWSVASVVFLI AGVGLLIWGWAFLRKEDHIEPKLVTPESDPLTKIQLTPSQKALAKYGFLVVALFIFQVFIGGFVAHYTVEGQNFYGIPVA DYFPYSLVRTWHIQSALFWIATAFLMAGLFLTPIINGGKDPKFQKLGVDVLWVALIIVCVGSFISQYFSIAEIMPAKYNF WFGHQGYEFIDLGRFWQILKWVGILIWLVLMSRGILPAFKNKGDNNLLAIFFASVVCVGLFYGSGLSYGEHTHLTIMEYW RWWVVHLWVEGFFEVFATVSLAFIFYNLGLVNKKIATASSIASAALFLLGGVPGTFHHLYFSGTTTPIMAIGASFSALEV VPLIVLGYEGYEHWSMQHKSPWMHKLKWPIMCFVAVAFWNMLGAGVFGFMINPPVSLFYLQGLNTTAVHSHAALFGVYGF LALGFVLLVMRYIRPDYVFSDTLMKTGFWLLNLGLVLMIATSLLPIGIFQAHASITEGLWYARSEGFLQQDFLVTLRWIR TFGDVIFITGAVCVALQVVKLTFAKPSHTNYQPNSPVNK
Sequences:
>Translated_759_residues MGEYKKYWWGLIAILIVTFSFLGWGGVEIYRTAPPIPERFVDNQGQTIVTKDDIMAGQSAWQRTGGQQLGSVLGHGAYQA PDWTADWLHRELVAWRNIKSNELYAVDYDAATEDQKAVLDAQVKKEYRSSAVDEHNTVVLSKTRIEAINHIAPYYMSVYG DDPEFQKTRENFAMKNNTITSVEAREKLTNFFFWTAWVASAERPGTTATYTNNWPHEPIIGNKPTTENLMWSVASVVFLI AGVGLLIWGWAFLRKEDHIEPKLVTPESDPLTKIQLTPSQKALAKYGFLVVALFIFQVFIGGFVAHYTVEGQNFYGIPVA DYFPYSLVRTWHIQSALFWIATAFLMAGLFLTPIINGGKDPKFQKLGVDVLWVALIIVCVGSFISQYFSIAEIMPAKYNF WFGHQGYEFIDLGRFWQILKWVGILIWLVLMSRGILPAFKNKGDNNLLAIFFASVVCVGLFYGSGLSYGEHTHLTIMEYW RWWVVHLWVEGFFEVFATVSLAFIFYNLGLVNKKIATASSIASAALFLLGGVPGTFHHLYFSGTTTPIMAIGASFSALEV VPLIVLGYEGYEHWSMQHKSPWMHKLKWPIMCFVAVAFWNMLGAGVFGFMINPPVSLFYLQGLNTTAVHSHAALFGVYGF LALGFVLLVMRYIRPDYVFSDTLMKTGFWLLNLGLVLMIATSLLPIGIFQAHASITEGLWYARSEGFLQQDFLVTLRWIR TFGDVIFITGAVCVALQVVKLTFAKPSHTNYQPNSPVNK >Mature_758_residues GEYKKYWWGLIAILIVTFSFLGWGGVEIYRTAPPIPERFVDNQGQTIVTKDDIMAGQSAWQRTGGQQLGSVLGHGAYQAP DWTADWLHRELVAWRNIKSNELYAVDYDAATEDQKAVLDAQVKKEYRSSAVDEHNTVVLSKTRIEAINHIAPYYMSVYGD DPEFQKTRENFAMKNNTITSVEAREKLTNFFFWTAWVASAERPGTTATYTNNWPHEPIIGNKPTTENLMWSVASVVFLIA GVGLLIWGWAFLRKEDHIEPKLVTPESDPLTKIQLTPSQKALAKYGFLVVALFIFQVFIGGFVAHYTVEGQNFYGIPVAD YFPYSLVRTWHIQSALFWIATAFLMAGLFLTPIINGGKDPKFQKLGVDVLWVALIIVCVGSFISQYFSIAEIMPAKYNFW FGHQGYEFIDLGRFWQILKWVGILIWLVLMSRGILPAFKNKGDNNLLAIFFASVVCVGLFYGSGLSYGEHTHLTIMEYWR WWVVHLWVEGFFEVFATVSLAFIFYNLGLVNKKIATASSIASAALFLLGGVPGTFHHLYFSGTTTPIMAIGASFSALEVV PLIVLGYEGYEHWSMQHKSPWMHKLKWPIMCFVAVAFWNMLGAGVFGFMINPPVSLFYLQGLNTTAVHSHAALFGVYGFL ALGFVLLVMRYIRPDYVFSDTLMKTGFWLLNLGLVLMIATSLLPIGIFQAHASITEGLWYARSEGFLQQDFLVTLRWIRT FGDVIFITGAVCVALQVVKLTFAKPSHTNYQPNSPVNK
Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen red
COG id: COG3256
COG function: function code P; Nitric oxide reductase large subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme-copper respiratory oxidase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000883 [H]
Pfam domain/function: PF00115 COX1 [H]
EC number: =1.7.99.7 [H]
Molecular weight: Translated: 85651; Mature: 85520
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00077 COX1_CUB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEYKKYWWGLIAILIVTFSFLGWGGVEIYRTAPPIPERFVDNQGQTIVTKDDIMAGQSA CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCEEEEHHHHHHCHHH WQRTGGQQLGSVLGHGAYQAPDWTADWLHRELVAWRNIKSNELYAVDYDAATEDQKAVLD HHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH AQVKKEYRSSAVDEHNTVVLSKTRIEAINHIAPYYMSVYGDDPEFQKTRENFAMKNNTIT HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCEE SVEAREKLTNFFFWTAWVASAERPGTTATYTNNWPHEPIIGNKPTTENLMWSVASVVFLI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGVGLLIWGWAFLRKEDHIEPKLVTPESDPLTKIQLTPSQKALAKYGFLVVALFIFQVFI HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH GGFVAHYTVEGQNFYGIPVADYFPYSLVRTWHIQSALFWIATAFLMAGLFLTPIINGGKD HHHHHEEEECCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKFQKLGVDVLWVALIIVCVGSFISQYFSIAEIMPAKYNFWFGHQGYEFIDLGRFWQILK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH WVGILIWLVLMSRGILPAFKNKGDNNLLAIFFASVVCVGLFYGSGLSYGEHTHLTIMEYW HHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RWWVVHLWVEGFFEVFATVSLAFIFYNLGLVNKKIATASSIASAALFLLGGVPGTFHHLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEE FSGTTTPIMAIGASFSALEVVPLIVLGYEGYEHWSMQHKSPWMHKLKWPIMCFVAVAFWN ECCCCCCHHHHCCCCHHHHHHHHHEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MLGAGVFGFMINPPVSLFYLQGLNTTAVHSHAALFGVYGFLALGFVLLVMRYIRPDYVFS HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DTLMKTGFWLLNLGLVLMIATSLLPIGIFQAHASITEGLWYARSEGFLQQDFLVTLRWIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TFGDVIFITGAVCVALQVVKLTFAKPSHTNYQPNSPVNK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GEYKKYWWGLIAILIVTFSFLGWGGVEIYRTAPPIPERFVDNQGQTIVTKDDIMAGQSA CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCEEEEHHHHHHCHHH WQRTGGQQLGSVLGHGAYQAPDWTADWLHRELVAWRNIKSNELYAVDYDAATEDQKAVLD HHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH AQVKKEYRSSAVDEHNTVVLSKTRIEAINHIAPYYMSVYGDDPEFQKTRENFAMKNNTIT HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCEE SVEAREKLTNFFFWTAWVASAERPGTTATYTNNWPHEPIIGNKPTTENLMWSVASVVFLI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGVGLLIWGWAFLRKEDHIEPKLVTPESDPLTKIQLTPSQKALAKYGFLVVALFIFQVFI HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH GGFVAHYTVEGQNFYGIPVADYFPYSLVRTWHIQSALFWIATAFLMAGLFLTPIINGGKD HHHHHEEEECCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKFQKLGVDVLWVALIIVCVGSFISQYFSIAEIMPAKYNFWFGHQGYEFIDLGRFWQILK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH WVGILIWLVLMSRGILPAFKNKGDNNLLAIFFASVVCVGLFYGSGLSYGEHTHLTIMEYW HHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RWWVVHLWVEGFFEVFATVSLAFIFYNLGLVNKKIATASSIASAALFLLGGVPGTFHHLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEE FSGTTTPIMAIGASFSALEVVPLIVLGYEGYEHWSMQHKSPWMHKLKWPIMCFVAVAFWN ECCCCCCHHHHCCCCHHHHHHHHHEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MLGAGVFGFMINPPVSLFYLQGLNTTAVHSHAALFGVYGFLALGFVLLVMRYIRPDYVFS HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DTLMKTGFWLLNLGLVLMIATSLLPIGIFQAHASITEGLWYARSEGFLQQDFLVTLRWIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TFGDVIFITGAVCVALQVVKLTFAKPSHTNYQPNSPVNK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7508388; 2542222; 9521721 [H]