| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ykvI [H]
Identifier: 148653318
GI number: 148653318
Start: 1853321
End: 1854412
Strand: Direct
Name: ykvI [H]
Synonym: PsycPRwf_1518
Alternate gene names: 148653318
Gene position: 1853321-1854412 (Clockwise)
Preceding gene: 148653317
Following gene: 148653320
Centisome position: 62.21
GC content: 45.97
Gene sequence:
>1092_bases ATGAGTAGTTCAGTAATCAGGGCCATTAGCTACGCAGGGGTTTACGTCGGGGCAGTCATTGGCGCAGGCTATGCCAGTGG TCAAGAAGTGATGCAGTTTTTTGCCGGTTATGGCTTAGTGGGTATCATTGGTGCCATTATTACCACGTTGTTATTTATTT GGTACGGCTCAGTATTTATGGAGCTGGGCAACCGATTGCAGACCTGCAGTCATCGCGATGTATTGAACTACTTATGTGGT AATAAGCTTGGCTTTTTAGGGGACTATGTCCTGCTGTTTTTTATGTTCGGCTGCGTCAGCATTATGTTCTCAGGCGGCGG GGCGGCCATTCATGAATATTGGGGATTGTCTGTGACGACCGGTAAGCTGATTATCGCAGCCATGACTTTAGCTACCGTAA TATTCGGCTTCTCCTCTTCGGTGCGCGCACTCGGTATCGTCTCGCCCATTATTATCTTTAGCGTGATAGCCATCTCAATC ATGACCCTAAGCACTCACTATGACCAGCTGGGTACGGTTGATGAGAGCCTAAAAAGCCTGACCCCTACTTTGGCAACCCC AGTCTGGTGGACCTCGGCCATCGTCTATGTGTCCTATAACGTCAGCTTGGCCACATCTACTTTAACGGCGATGGGCGGTA AAGAATCCAATCTAAAAACCCTACGCAGCGCTGGTATATTAGGTGGGTTTTCACTAGGGCTATGTTTGTTATTCATCACC GTCGCCTTGCTGTCAGACTTGAGTAATGTGATTGAATATCAGATTCCTTTTTTACAAATTGCCACCAATATCAGCCCTCT AATTGGTATCTTGTTTAGTGTGGTTTTGGTCATTGCTATCTTTACCACAGCGGTTACCAACTTATACGGCTGCGTAATCC GTTTTTATGACTCTCATAAAAATCCCACTCAGTTTCGCACCTTGACCGTAAGTTTAGTGGCTCTGTCGCTACTGGCTTCC CTATTCCCTTTTAGCACTTTAATTAACGTGCTATATCCAGCCTTAGGCTTACTGGGCATGGTGATTATGGTATGTGCGCT ATACAAAACCTTCACCGGTCAAGTCTTCTTAAAAGATGATGCCAAGCTATAA
Upstream 100 bases:
>100_bases GCCTATCAAGGTAACTGTCTTTTCATCAGCAACCTACTTAATAAAGGTTATGCGCCAGCTGCTTAAAGGCGGCAGGCGCT CAAATAGGGATATCAATATT
Downstream 100 bases:
>100_bases TCAGTGATTAAAAACAGCCAGCGCTAAACAATAAAAATCCCGCCATCTTAGATAGCGGGATTTTTATTGTTAGCTAAGGT ACTAATCTAAAAGTACTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSSSVIRAISYAGVYVGAVIGAGYASGQEVMQFFAGYGLVGIIGAIITTLLFIWYGSVFMELGNRLQTCSHRDVLNYLCG NKLGFLGDYVLLFFMFGCVSIMFSGGGAAIHEYWGLSVTTGKLIIAAMTLATVIFGFSSSVRALGIVSPIIIFSVIAISI MTLSTHYDQLGTVDESLKSLTPTLATPVWWTSAIVYVSYNVSLATSTLTAMGGKESNLKTLRSAGILGGFSLGLCLLFIT VALLSDLSNVIEYQIPFLQIATNISPLIGILFSVVLVIAIFTTAVTNLYGCVIRFYDSHKNPTQFRTLTVSLVALSLLAS LFPFSTLINVLYPALGLLGMVIMVCALYKTFTGQVFLKDDAKL
Sequences:
>Translated_363_residues MSSSVIRAISYAGVYVGAVIGAGYASGQEVMQFFAGYGLVGIIGAIITTLLFIWYGSVFMELGNRLQTCSHRDVLNYLCG NKLGFLGDYVLLFFMFGCVSIMFSGGGAAIHEYWGLSVTTGKLIIAAMTLATVIFGFSSSVRALGIVSPIIIFSVIAISI MTLSTHYDQLGTVDESLKSLTPTLATPVWWTSAIVYVSYNVSLATSTLTAMGGKESNLKTLRSAGILGGFSLGLCLLFIT VALLSDLSNVIEYQIPFLQIATNISPLIGILFSVVLVIAIFTTAVTNLYGCVIRFYDSHKNPTQFRTLTVSLVALSLLAS LFPFSTLINVLYPALGLLGMVIMVCALYKTFTGQVFLKDDAKL >Mature_362_residues SSSVIRAISYAGVYVGAVIGAGYASGQEVMQFFAGYGLVGIIGAIITTLLFIWYGSVFMELGNRLQTCSHRDVLNYLCGN KLGFLGDYVLLFFMFGCVSIMFSGGGAAIHEYWGLSVTTGKLIIAAMTLATVIFGFSSSVRALGIVSPIIIFSVIAISIM TLSTHYDQLGTVDESLKSLTPTLATPVWWTSAIVYVSYNVSLATSTLTAMGGKESNLKTLRSAGILGGFSLGLCLLFITV ALLSDLSNVIEYQIPFLQIATNISPLIGILFSVVLVIAIFTTAVTNLYGCVIRFYDSHKNPTQFRTLTVSLVALSLLASL FPFSTLINVLYPALGLLGMVIMVCALYKTFTGQVFLKDDAKL
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38924; Mature: 38792
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSVIRAISYAGVYVGAVIGAGYASGQEVMQFFAGYGLVGIIGAIITTLLFIWYGSVFM CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ELGNRLQTCSHRDVLNYLCGNKLGFLGDYVLLFFMFGCVSIMFSGGGAAIHEYWGLSVTT HHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEH GKLIIAAMTLATVIFGFSSSVRALGIVSPIIIFSVIAISIMTLSTHYDQLGTVDESLKSL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TPTLATPVWWTSAIVYVSYNVSLATSTLTAMGGKESNLKTLRSAGILGGFSLGLCLLFIT CHHHCCCHHHHHEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH VALLSDLSNVIEYQIPFLQIATNISPLIGILFSVVLVIAIFTTAVTNLYGCVIRFYDSHK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPTQFRTLTVSLVALSLLASLFPFSTLINVLYPALGLLGMVIMVCALYKTFTGQVFLKDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC AKL CCC >Mature Secondary Structure SSSVIRAISYAGVYVGAVIGAGYASGQEVMQFFAGYGLVGIIGAIITTLLFIWYGSVFM CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ELGNRLQTCSHRDVLNYLCGNKLGFLGDYVLLFFMFGCVSIMFSGGGAAIHEYWGLSVTT HHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEH GKLIIAAMTLATVIFGFSSSVRALGIVSPIIIFSVIAISIMTLSTHYDQLGTVDESLKSL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TPTLATPVWWTSAIVYVSYNVSLATSTLTAMGGKESNLKTLRSAGILGGFSLGLCLLFIT CHHHCCCHHHHHEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH VALLSDLSNVIEYQIPFLQIATNISPLIGILFSVVLVIAIFTTAVTNLYGCVIRFYDSHK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPTQFRTLTVSLVALSLLASLFPFSTLINVLYPALGLLGMVIMVCALYKTFTGQVFLKDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC AKL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]