Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is yqhA [C]

Identifier: 148653144

GI number: 148653144

Start: 1638533

End: 1639057

Strand: Direct

Name: yqhA [C]

Synonym: PsycPRwf_1342

Alternate gene names: 148653144

Gene position: 1638533-1639057 (Clockwise)

Preceding gene: 148653143

Following gene: 148653145

Centisome position: 55.0

GC content: 35.62

Gene sequence:

>525_bases
ATGCCTAAGAGGGCTGAGCAAAGTCTAGAGAAAACTATATTTAACAGTCGCTGGCTGTTAGCTCCATTTTATTTAGGGCT
TATAATAGGAATTATTCTTCTTTTCATAAAATTTTTTCAAAAAATCTGGTATATCACTACGCATGTATTCACTGCTAGCG
AAGCCGATGTAATTGTTGGCACGTTAGTTTTAATAGATATAGCACTAGTGGCCAGCTTATTACTTATTATTGTATTTAGT
GGGTACGAAATATTTGTTTCAAAAATTGATACAGGAGACCATGAAGATCGTCCGGGCTGGATGGGTACCATTGATTTCTC
TGGCTTAAAACTAAAGGTCATTAGTGCCATTGTTGCTATTTCTGCAATTGACCTTCTCAAATCATTTATGAATATACCTG
ACCAGATAAGTGATGGGGACGCTAATAGACTAATGTGGAAGGTCGTTATACATATGACATTCGTTTTATCTGGACTATTG
TTTGCTTTAATGGATAAGATTGCTGGTGATACTAAAAAGCACTAA

Upstream 100 bases:

>100_bases
AGTGGCGGTTTTTCATCCTCTTAAAGTTAATGACTTGCCAGCAGTACATTTGCTAAAATTAAAAAACCCATCGAATCATG
AATCAAAAAAGAGGACACAT

Downstream 100 bases:

>100_bases
ATAAAACATTTGGATGAAGATCTATAAGTTAACTAAACCGCCATAGTGGCGGTTTTTTTGTGCTCAATACCAAACTAATA
GTTCTTTCAGTAATGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPKRAEQSLEKTIFNSRWLLAPFYLGLIIGIILLFIKFFQKIWYITTHVFTASEADVIVGTLVLIDIALVASLLLIIVFS
GYEIFVSKIDTGDHEDRPGWMGTIDFSGLKLKVISAIVAISAIDLLKSFMNIPDQISDGDANRLMWKVVIHMTFVLSGLL
FALMDKIAGDTKKH

Sequences:

>Translated_174_residues
MPKRAEQSLEKTIFNSRWLLAPFYLGLIIGIILLFIKFFQKIWYITTHVFTASEADVIVGTLVLIDIALVASLLLIIVFS
GYEIFVSKIDTGDHEDRPGWMGTIDFSGLKLKVISAIVAISAIDLLKSFMNIPDQISDGDANRLMWKVVIHMTFVLSGLL
FALMDKIAGDTKKH
>Mature_173_residues
PKRAEQSLEKTIFNSRWLLAPFYLGLIIGIILLFIKFFQKIWYITTHVFTASEADVIVGTLVLIDIALVASLLLIIVFSG
YEIFVSKIDTGDHEDRPGWMGTIDFSGLKLKVISAIVAISAIDLLKSFMNIPDQISDGDANRLMWKVVIHMTFVLSGLLF
ALMDKIAGDTKKH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=166, Percent_Identity=43.3734939759036, Blast_Score=140, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19489; Mature: 19358

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRAEQSLEKTIFNSRWLLAPFYLGLIIGIILLFIKFFQKIWYITTHVFTASEADVIVG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TLVLIDIALVASLLLIIVFSGYEIFVSKIDTGDHEDRPGWMGTIDFSGLKLKVISAIVAI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
SAIDLLKSFMNIPDQISDGDANRLMWKVVIHMTFVLSGLLFALMDKIAGDTKKH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKRAEQSLEKTIFNSRWLLAPFYLGLIIGIILLFIKFFQKIWYITTHVFTASEADVIVG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TLVLIDIALVASLLLIIVFSGYEIFVSKIDTGDHEDRPGWMGTIDFSGLKLKVISAIVAI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
SAIDLLKSFMNIPDQISDGDANRLMWKVVIHMTFVLSGLLFALMDKIAGDTKKH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA