Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653145

Identifier: 148653145

GI number: 148653145

Start: 1639382

End: 1640698

Strand: Direct

Name: 148653145

Synonym: PsycPRwf_1343

Alternate gene names: NA

Gene position: 1639382-1640698 (Clockwise)

Preceding gene: 148653144

Following gene: 148653146

Centisome position: 55.03

GC content: 40.32

Gene sequence:

>1317_bases
ATGGTTATTTTTTGCCTCATCAACATCCCTGTTGCAGTTGCAATCGTTTTAGCTGCATTACTTGGCGGTTTACACGCAGG
TATGGATTTTCCGGCAATTTTAGAAAGTTTAAACGATAATATATTGGGTGGCGCTCAGGTTGGCATGACCTATATTATGG
TTGGGGCTTTCGCAGTTGCTTTAGCTAGAAGTGGTATTCTTGATTGGTTGGCACAGAAAATGACCCACCGCCTAAACAGG
GATAGCGTACAAGTACGAAACCAAGTTAAGTGGACTTTATTTTTTATCTTTATCGTCGCCTCCCTGTTATCGCAAAATTT
AATACCTGTCCATATCGCTTTTATACCCGTATTAATCCCTCCCCTACTAAATATGATGAATAAGCTAAAAATAGATAGAC
GAGCAGTCGCCTGTATTTTGGCCTGTGGTATCAGCTCATCATACTTACTATTGCCATTCGGTTTTGGCGCTATATATCTC
AATGAAATACTATTAGAGAATATAAATACTGTAGGAGGTGGTTTAGGACTAGAAGCAACTGCTGGCATGGCACCTAAGGC
TATGTTTTTCCCAGTTATGGGTATACTAGCTGGTATGCTCGTTGCTGTATTTATTAGTTATCGTAAGCCACGCGAGTATG
CTTTAAATTTAGATACCATGAACACAGAAGAATACAAAGTTGTTAGTGCTATTAACTGGCAACCATTATTGATGACTTTA
TTAGCTGTAGTAGCGGTATTACTTTTTCAGGTGTTTTTTGATTCTCTGTTTATAGGTGCAATGATTGGCTTTATGATTCT
TGGTTTTTCAGGTATTTATAGTTGGAAAGGGCAAGATGATGTATTCACTCAAGGCATTCGATTAATGGCTGAAATTGCTG
TCATTATTACTATTGCCTCTGGATTTGCAGGTGTTTTGACTGCCACAGGGGATATCGACCCCCTTGTCGCCTCTGCAACA
GAGTTCTTTGGTAATAATCAGTTGCTCGGTGCTGCAATAATGCTGTTAGTTGGACTGTTTATCACAATCGGGTTTGGTGA
CTCTTTTGCTTCAGTGCCTATACTAGCACCTATATACATCCCTTTAGCTGTTGCGCTGGGCTTTTCACCACTTGCCACTA
TAGCTTTATTAGGAGCATCAGCCGCACTAGGTGATGCCGGATCGCCCGCTTCAACAATTACTCTTGGTGCTACTGCTGGT
CTTAATGCAGATGGACAGCACGACCATGTTAAAGACAGTGTCATTCCAACTTTTTTACATGCAAATATAGGTATGTTGCT
TTTCACTTGGATTGCAGCTGTTTGGATTTTAAATTAA

Upstream 100 bases:

>100_bases
AAGCAGGGCTTTACCTGTCTTAGTGGGACTGATTACAGTTTATAGTCTGTTAATACTTTTATCAGTACAAATCAACGCTG
TAGCACTAGCCATTTTGTTG

Downstream 100 bases:

>100_bases
TGAAATAGTGCTTATCATCCATTTTTATAGAAATCAACCGCCCTACCAGGGCGGTTTTTTTGTTTCTGCCATTCAAGAAT
AAAGAGTAAATGAGCAGAAA

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MVIFCLINIPVAVAIVLAALLGGLHAGMDFPAILESLNDNILGGAQVGMTYIMVGAFAVALARSGILDWLAQKMTHRLNR
DSVQVRNQVKWTLFFIFIVASLLSQNLIPVHIAFIPVLIPPLLNMMNKLKIDRRAVACILACGISSSYLLLPFGFGAIYL
NEILLENINTVGGGLGLEATAGMAPKAMFFPVMGILAGMLVAVFISYRKPREYALNLDTMNTEEYKVVSAINWQPLLMTL
LAVVAVLLFQVFFDSLFIGAMIGFMILGFSGIYSWKGQDDVFTQGIRLMAEIAVIITIASGFAGVLTATGDIDPLVASAT
EFFGNNQLLGAAIMLLVGLFITIGFGDSFASVPILAPIYIPLAVALGFSPLATIALLGASAALGDAGSPASTITLGATAG
LNADGQHDHVKDSVIPTFLHANIGMLLFTWIAAVWILN

Sequences:

>Translated_438_residues
MVIFCLINIPVAVAIVLAALLGGLHAGMDFPAILESLNDNILGGAQVGMTYIMVGAFAVALARSGILDWLAQKMTHRLNR
DSVQVRNQVKWTLFFIFIVASLLSQNLIPVHIAFIPVLIPPLLNMMNKLKIDRRAVACILACGISSSYLLLPFGFGAIYL
NEILLENINTVGGGLGLEATAGMAPKAMFFPVMGILAGMLVAVFISYRKPREYALNLDTMNTEEYKVVSAINWQPLLMTL
LAVVAVLLFQVFFDSLFIGAMIGFMILGFSGIYSWKGQDDVFTQGIRLMAEIAVIITIASGFAGVLTATGDIDPLVASAT
EFFGNNQLLGAAIMLLVGLFITIGFGDSFASVPILAPIYIPLAVALGFSPLATIALLGASAALGDAGSPASTITLGATAG
LNADGQHDHVKDSVIPTFLHANIGMLLFTWIAAVWILN
>Mature_438_residues
MVIFCLINIPVAVAIVLAALLGGLHAGMDFPAILESLNDNILGGAQVGMTYIMVGAFAVALARSGILDWLAQKMTHRLNR
DSVQVRNQVKWTLFFIFIVASLLSQNLIPVHIAFIPVLIPPLLNMMNKLKIDRRAVACILACGISSSYLLLPFGFGAIYL
NEILLENINTVGGGLGLEATAGMAPKAMFFPVMGILAGMLVAVFISYRKPREYALNLDTMNTEEYKVVSAINWQPLLMTL
LAVVAVLLFQVFFDSLFIGAMIGFMILGFSGIYSWKGQDDVFTQGIRLMAEIAVIITIASGFAGVLTATGDIDPLVASAT
EFFGNNQLLGAAIMLLVGLFITIGFGDSFASVPILAPIYIPLAVALGFSPLATIALLGASAALGDAGSPASTITLGATAG
LNADGQHDHVKDSVIPTFLHANIGMLLFTWIAAVWILN

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 46552; Mature: 46552

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFCLINIPVAVAIVLAALLGGLHAGMDFPAILESLNDNILGGAQVGMTYIMVGAFAVA
CEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LARSGILDWLAQKMTHRLNRDSVQVRNQVKWTLFFIFIVASLLSQNLIPVHIAFIPVLIP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLLNMMNKLKIDRRAVACILACGISSSYLLLPFGFGAIYLNEILLENINTVGGGLGLEAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
AGMAPKAMFFPVMGILAGMLVAVFISYRKPREYALNLDTMNTEEYKVVSAINWQPLLMTL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCEEEEEECCCHHHHHHH
LAVVAVLLFQVFFDSLFIGAMIGFMILGFSGIYSWKGQDDVFTQGIRLMAEIAVIITIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GFAGVLTATGDIDPLVASATEFFGNNQLLGAAIMLLVGLFITIGFGDSFASVPILAPIYI
CCHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
PLAVALGFSPLATIALLGASAALGDAGSPASTITLGATAGLNADGQHDHVKDSVIPTFLH
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ANIGMLLFTWIAAVWILN
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVIFCLINIPVAVAIVLAALLGGLHAGMDFPAILESLNDNILGGAQVGMTYIMVGAFAVA
CEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LARSGILDWLAQKMTHRLNRDSVQVRNQVKWTLFFIFIVASLLSQNLIPVHIAFIPVLIP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLLNMMNKLKIDRRAVACILACGISSSYLLLPFGFGAIYLNEILLENINTVGGGLGLEAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
AGMAPKAMFFPVMGILAGMLVAVFISYRKPREYALNLDTMNTEEYKVVSAINWQPLLMTL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCEEEEEECCCHHHHHHH
LAVVAVLLFQVFFDSLFIGAMIGFMILGFSGIYSWKGQDDVFTQGIRLMAEIAVIITIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GFAGVLTATGDIDPLVASATEFFGNNQLLGAAIMLLVGLFITIGFGDSFASVPILAPIYI
CCHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
PLAVALGFSPLATIALLGASAALGDAGSPASTITLGATAGLNADGQHDHVKDSVIPTFLH
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ANIGMLLFTWIAAVWILN
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]