Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148653001

Identifier: 148653001

GI number: 148653001

Start: 1461221

End: 1461916

Strand: Direct

Name: 148653001

Synonym: PsycPRwf_1195

Alternate gene names: NA

Gene position: 1461221-1461916 (Clockwise)

Preceding gene: 148653000

Following gene: 148653002

Centisome position: 49.05

GC content: 45.69

Gene sequence:

>696_bases
ATGACCTTAAATCCCGTACGTCCTTTTGTGAGCGCAGTTGTGCTGGCCACCCTCACTGCTTTGGCAGGTTGTGATACGCG
CACCCAAAACCCAATGATGCAGACCATTCCTACCGATGCCGAGAAGTGGCAAGACAAATTGGGTGACACCTTAGAGCAGC
TTTCAGAAGAAGATAGCCAGCTTCTAAGCCGTTATATGCTACGGATGCGTTTAAGTGACGCTTATGAAAAAGGCGCTGTC
CCTAGAATTACCATTGGCCGGGCATTAGAGCAGCAGCGAAAGTACGAAGCACTGCATCCGGATAATCCCACAGGTAAAAA
AAGCCCAGTAACCACAGCTGTGCAGCCTGATAACTATCCGATAACCCTACTGCCGGCCAAAACCAGTGAAAACGACAGTT
TGAATAATGTTAAATTGTCTTTTGTGCTGTCAAATGAAGGGCAAACAGCTGTAAAAAGCTTTAAAGGTACCTTAATGCTG
CGTTATCCGGCATTCAAAAAACCCAAGCCGGTGGTCATTCCTTTTACCCTATTTGATCCGCCCATGTCGCCCAAACAGTC
TCGGAAAATGGAGGCGGATGTGAGCATAACTGACATCAATGTGATGAAAGCCATTCAAAACCCACAAAATATTGAAATTG
AGATAACCAATGGCGCTATGGTATTAGAAGATGGTCGCGAGATTGTGTTTAAGTAA

Upstream 100 bases:

>100_bases
TTTCGTTGTATGCTATCTTAATAGCGACAATACGCCTTTTTTGGCACGTTTTTTGGTGATTTTCTTTTGGCCCCTTAGAT
AGATAACTGGAGTAAGTGCC

Downstream 100 bases:

>100_bases
GCACTATTTGGTGCAATGTATGTGTTTTAACGTATGGTGAGTGAGTGATGCAGTTAAAAAGATTGACCGCCTTTCATAGC
GTAGCACGCTTAAAAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTLNPVRPFVSAVVLATLTALAGCDTRTQNPMMQTIPTDAEKWQDKLGDTLEQLSEEDSQLLSRYMLRMRLSDAYEKGAV
PRITIGRALEQQRKYEALHPDNPTGKKSPVTTAVQPDNYPITLLPAKTSENDSLNNVKLSFVLSNEGQTAVKSFKGTLML
RYPAFKKPKPVVIPFTLFDPPMSPKQSRKMEADVSITDINVMKAIQNPQNIEIEITNGAMVLEDGREIVFK

Sequences:

>Translated_231_residues
MTLNPVRPFVSAVVLATLTALAGCDTRTQNPMMQTIPTDAEKWQDKLGDTLEQLSEEDSQLLSRYMLRMRLSDAYEKGAV
PRITIGRALEQQRKYEALHPDNPTGKKSPVTTAVQPDNYPITLLPAKTSENDSLNNVKLSFVLSNEGQTAVKSFKGTLML
RYPAFKKPKPVVIPFTLFDPPMSPKQSRKMEADVSITDINVMKAIQNPQNIEIEITNGAMVLEDGREIVFK
>Mature_230_residues
TLNPVRPFVSAVVLATLTALAGCDTRTQNPMMQTIPTDAEKWQDKLGDTLEQLSEEDSQLLSRYMLRMRLSDAYEKGAVP
RITIGRALEQQRKYEALHPDNPTGKKSPVTTAVQPDNYPITLLPAKTSENDSLNNVKLSFVLSNEGQTAVKSFKGTLMLR
YPAFKKPKPVVIPFTLFDPPMSPKQSRKMEADVSITDINVMKAIQNPQNIEIEITNGAMVLEDGREIVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25780; Mature: 25649

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNPVRPFVSAVVLATLTALAGCDTRTQNPMMQTIPTDAEKWQDKLGDTLEQLSEEDSQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLSRYMLRMRLSDAYEKGAVPRITIGRALEQQRKYEALHPDNPTGKKSPVTTAVQPDNYP
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCC
ITLLPAKTSENDSLNNVKLSFVLSNEGQTAVKSFKGTLMLRYPAFKKPKPVVIPFTLFDP
EEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCC
PMSPKQSRKMEADVSITDINVMKAIQNPQNIEIEITNGAMVLEDGREIVFK
CCCCHHHCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCEEEEECCCEEECC
>Mature Secondary Structure 
TLNPVRPFVSAVVLATLTALAGCDTRTQNPMMQTIPTDAEKWQDKLGDTLEQLSEEDSQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLSRYMLRMRLSDAYEKGAVPRITIGRALEQQRKYEALHPDNPTGKKSPVTTAVQPDNYP
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCC
ITLLPAKTSENDSLNNVKLSFVLSNEGQTAVKSFKGTLMLRYPAFKKPKPVVIPFTLFDP
EEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCC
PMSPKQSRKMEADVSITDINVMKAIQNPQNIEIEITNGAMVLEDGREIVFK
CCCCHHHCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA