| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652982
Identifier: 148652982
GI number: 148652982
Start: 1436937
End: 1438670
Strand: Direct
Name: 148652982
Synonym: PsycPRwf_1176
Alternate gene names: NA
Gene position: 1436937-1438670 (Clockwise)
Preceding gene: 148652981
Following gene: 148652983
Centisome position: 48.24
GC content: 44.12
Gene sequence:
>1734_bases ATGACCCAGTTACAATCCGCCAGCCCCAATCCCAAAACCGTTGCCATTATTGGCTCTGGCGTATCAGGCTTGGTTTGTGC TCATTATTTAGTGGCAAGTCACAAGGTAACTATCTTTGAGGCCAATGACTATCTTGGCGGGCATGTAAATACCATTGACG TTGCTCTAACAACACCGCGAAAGCTAAAAAAAGATGAGATTGAAACCGCTGCGATTGATACCGGTTTTATTGTGTTTAAC GAGCGTACGTATCCTAATTTTTTTAGGCTGTTAGATGAGTTAGACGTCCCGTTTCAAAAGACGGACATGAGCTTTTCGGT CAAAAACCCTGCGATTAATTTTGAGTACAATGGTCACACCTTAAATAGCTTGGTGTCGCAGCGTAAAAACTTAATTAGTC CGAAGTTTTGGCGTTTTGCAAAAGACATTATTGCCTTTAATAAACACATAAAACAGCGACATCAAGCGTATAAGGCGCTG CGTCAAGCCATTGATCAGTTGACCTTAGCTGCTGAGCAACTGAATGCGCAAAACAAACTTACTAAGCGCAAAGCCCAGAG GCTGCAAGAGCAATTGGCCAATAAAAATAAGGCGCTTGAGACGCTCAGTCAAGAGACACTAGGGGACTATTTATCCGAGC AAAAATACAGCCAACTATTCCAACAAAACTATCTACTGCCCATGGTGTCTGCCATTTGGTCTATGCAGATTGAGCGCTCT AAATCGTTTCCACTGATATTTTTCGCTCAATTTTTTGACAATCATGGCCTGCTCGATATTATCAATCGCCCACAGTGGTT CACGATCAAAGGCGGCTCGAAGCAATATGTCAATAAGTTGATTGAACGCTATGCCAACTTAGGCGGTAATGCGCTGGTTA ATAGCCCTGTGCAATCGATTACTCGCCAAACCCATGGCAATAAAACCGATGGCCATAAAAACAGCATCACCATCCACTAT AAAGACGCTAAAGGAGTTAGTAAATCAGCGAGCTTTGATGAGGTGATTGTTGCCTGCCATGCAGATGTAGCAAAGCGCCT GCTGGCCGACATCAATGAGCAAGAATCTCAAATACTGGGCGCATTTTCTTTTATCGATAATGAGGCCATTTTGCATACAG ACACAAGCGTACTGCCAAAAAAGCCATTGGCATGGGCCAGCTGGAATTATTTATTACCCAGCACCAATCAGCAACTACAG CACTCTCAAGCACCAGCCAGCCAATCATTAGGCGACAACCATTCATTACACAGTGAGTTGAATGGGTTAGATGAGCTAAA GCCGGTCTTAACGTACCACATGAATATCCTTCAGCGACTGGATAAGCATCACAACTATCTTGTGACCCTCAACGAGCAAA TAGACACAGCGCAGGTGATAAAGCGTATTGATTATCGTCATCCTATTTATGATATCAAGATGACACTGGCACAAAAGCAG TGGCACCGTCTTGCCAGCCAAGACAACCACACCCACTTTTGCGGTGCGTATTGGTTTAGCGGCTTTCATGAAGACGGCGT GAGAAGTGGTCTAAGGGTGTGCCAACATTTAGGGGTTAACATTGAGCTTCTCGATGCTATTAATCCGGCTCATTTAGATA AAGTGATTGAGCCTAACCCCACCTTTAATAATAGTGTCCTGCCGATTAAGGCCGATAAAAACCAGGCCAGACTAAGTCAG CGCCAGCTGATATCCGCCTCTACTAATACGTCATTAAACGAGGTGTTTCAATAA
Upstream 100 bases:
>100_bases TTTGTGTCTAGCAAGCTATATGCCAATCGATAAGTATCAAAACAGATCACAAATAAATTTAGACAACGCTCTAAAGCATA ACGATAACAAGAGATACTTT
Downstream 100 bases:
>100_bases AAAATATAATGGCCATACAGAATAGGTATAAAAATAATACCACGGAGGGTTTTGAGCATGCCTACCAACATAAGCGCGCA TAAAGTAAGCGCAGATAAAG
Product: amine oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; FAD-Dependent Oxidoreductase; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductase Protein; Flavin Containing Amine Oxidoreductas
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MTQLQSASPNPKTVAIIGSGVSGLVCAHYLVASHKVTIFEANDYLGGHVNTIDVALTTPRKLKKDEIETAAIDTGFIVFN ERTYPNFFRLLDELDVPFQKTDMSFSVKNPAINFEYNGHTLNSLVSQRKNLISPKFWRFAKDIIAFNKHIKQRHQAYKAL RQAIDQLTLAAEQLNAQNKLTKRKAQRLQEQLANKNKALETLSQETLGDYLSEQKYSQLFQQNYLLPMVSAIWSMQIERS KSFPLIFFAQFFDNHGLLDIINRPQWFTIKGGSKQYVNKLIERYANLGGNALVNSPVQSITRQTHGNKTDGHKNSITIHY KDAKGVSKSASFDEVIVACHADVAKRLLADINEQESQILGAFSFIDNEAILHTDTSVLPKKPLAWASWNYLLPSTNQQLQ HSQAPASQSLGDNHSLHSELNGLDELKPVLTYHMNILQRLDKHHNYLVTLNEQIDTAQVIKRIDYRHPIYDIKMTLAQKQ WHRLASQDNHTHFCGAYWFSGFHEDGVRSGLRVCQHLGVNIELLDAINPAHLDKVIEPNPTFNNSVLPIKADKNQARLSQ RQLISASTNTSLNEVFQ
Sequences:
>Translated_577_residues MTQLQSASPNPKTVAIIGSGVSGLVCAHYLVASHKVTIFEANDYLGGHVNTIDVALTTPRKLKKDEIETAAIDTGFIVFN ERTYPNFFRLLDELDVPFQKTDMSFSVKNPAINFEYNGHTLNSLVSQRKNLISPKFWRFAKDIIAFNKHIKQRHQAYKAL RQAIDQLTLAAEQLNAQNKLTKRKAQRLQEQLANKNKALETLSQETLGDYLSEQKYSQLFQQNYLLPMVSAIWSMQIERS KSFPLIFFAQFFDNHGLLDIINRPQWFTIKGGSKQYVNKLIERYANLGGNALVNSPVQSITRQTHGNKTDGHKNSITIHY KDAKGVSKSASFDEVIVACHADVAKRLLADINEQESQILGAFSFIDNEAILHTDTSVLPKKPLAWASWNYLLPSTNQQLQ HSQAPASQSLGDNHSLHSELNGLDELKPVLTYHMNILQRLDKHHNYLVTLNEQIDTAQVIKRIDYRHPIYDIKMTLAQKQ WHRLASQDNHTHFCGAYWFSGFHEDGVRSGLRVCQHLGVNIELLDAINPAHLDKVIEPNPTFNNSVLPIKADKNQARLSQ RQLISASTNTSLNEVFQ >Mature_576_residues TQLQSASPNPKTVAIIGSGVSGLVCAHYLVASHKVTIFEANDYLGGHVNTIDVALTTPRKLKKDEIETAAIDTGFIVFNE RTYPNFFRLLDELDVPFQKTDMSFSVKNPAINFEYNGHTLNSLVSQRKNLISPKFWRFAKDIIAFNKHIKQRHQAYKALR QAIDQLTLAAEQLNAQNKLTKRKAQRLQEQLANKNKALETLSQETLGDYLSEQKYSQLFQQNYLLPMVSAIWSMQIERSK SFPLIFFAQFFDNHGLLDIINRPQWFTIKGGSKQYVNKLIERYANLGGNALVNSPVQSITRQTHGNKTDGHKNSITIHYK DAKGVSKSASFDEVIVACHADVAKRLLADINEQESQILGAFSFIDNEAILHTDTSVLPKKPLAWASWNYLLPSTNQQLQH SQAPASQSLGDNHSLHSELNGLDELKPVLTYHMNILQRLDKHHNYLVTLNEQIDTAQVIKRIDYRHPIYDIKMTLAQKQW HRLASQDNHTHFCGAYWFSGFHEDGVRSGLRVCQHLGVNIELLDAINPAHLDKVIEPNPTFNNSVLPIKADKNQARLSQR QLISASTNTSLNEVFQ
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65414; Mature: 65283
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLQSASPNPKTVAIIGSGVSGLVCAHYLVASHKVTIFEANDYLGGHVNTIDVALTTPR CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCH KLKKDEIETAAIDTGFIVFNERTYPNFFRLLDELDVPFQKTDMSFSVKNPAINFEYNGHT HHHHHHHHHHEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCH LNSLVSQRKNLISPKFWRFAKDIIAFNKHIKQRHQAYKALRQAIDQLTLAAEQLNAQNKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRKAQRLQEQLANKNKALETLSQETLGDYLSEQKYSQLFQQNYLLPMVSAIWSMQIERS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC KSFPLIFFAQFFDNHGLLDIINRPQWFTIKGGSKQYVNKLIERYANLGGNALVNSPVQSI CCCCEEEEEHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHCCHHHHH TRQTHGNKTDGHKNSITIHYKDAKGVSKSASFDEVIVACHADVAKRLLADINEQESQILG HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AFSFIDNEAILHTDTSVLPKKPLAWASWNYLLPSTNQQLQHSQAPASQSLGDNHSLHSEL HHHHHCCCEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCHHCCCCCCHHHHHH NGLDELKPVLTYHMNILQRLDKHHNYLVTLNEQIDTAQVIKRIDYRHPIYDIKMTLAQKQ CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH WHRLASQDNHTHFCGAYWFSGFHEDGVRSGLRVCQHLGVNIELLDAINPAHLDKVIEPNP HHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCC TFNNSVLPIKADKNQARLSQRQLISASTNTSLNEVFQ CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure TQLQSASPNPKTVAIIGSGVSGLVCAHYLVASHKVTIFEANDYLGGHVNTIDVALTTPR CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCH KLKKDEIETAAIDTGFIVFNERTYPNFFRLLDELDVPFQKTDMSFSVKNPAINFEYNGHT HHHHHHHHHHEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCH LNSLVSQRKNLISPKFWRFAKDIIAFNKHIKQRHQAYKALRQAIDQLTLAAEQLNAQNKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRKAQRLQEQLANKNKALETLSQETLGDYLSEQKYSQLFQQNYLLPMVSAIWSMQIERS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC KSFPLIFFAQFFDNHGLLDIINRPQWFTIKGGSKQYVNKLIERYANLGGNALVNSPVQSI CCCCEEEEEHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHCCHHHHH TRQTHGNKTDGHKNSITIHYKDAKGVSKSASFDEVIVACHADVAKRLLADINEQESQILG HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AFSFIDNEAILHTDTSVLPKKPLAWASWNYLLPSTNQQLQHSQAPASQSLGDNHSLHSEL HHHHHCCCEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCHHCCCCCCHHHHHH NGLDELKPVLTYHMNILQRLDKHHNYLVTLNEQIDTAQVIKRIDYRHPIYDIKMTLAQKQ CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH WHRLASQDNHTHFCGAYWFSGFHEDGVRSGLRVCQHLGVNIELLDAINPAHLDKVIEPNP HHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCC TFNNSVLPIKADKNQARLSQRQLISASTNTSLNEVFQ CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA