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The map label for this gene is ydfG [C]

Identifier: 148652981

GI number: 148652981

Start: 1436105

End: 1436869

Strand: Direct

Name: ydfG [C]

Synonym: PsycPRwf_1175

Alternate gene names: 148652981

Gene position: 1436105-1436869 (Clockwise)

Preceding gene: 148652980

Following gene: 148652982

Centisome position: 48.21

GC content: 45.49

Gene sequence:

>765_bases
ATGAGCACACGCATTCTTATTACGGGCGCCACCTCTGGCATGGGGTATCAATTAGCCGTTGATTATCTACAAGCTGGCCA
TGTGGTGTATGCAGCAGGGCGCAATCAAGAGGCTCTTAATAAGCTTGGCCGCTTAGGGGCTGTATCTATCTGTGTGGATT
TAACCGATTATCATCAGGTGATGCAGGCATTTGGTGATATTGATGCGCTAGATATTGTGATTTGTTGCGCAGGTGTTTGT
CATTATATTGATATTACCCCTGATACGAGCGTATCTGAGCCTAGCGGCTGTAACTTTGGGTTTGATGGTCAAAACATAAT
GCACACTATCAATACCAATTTAAGTACGTTAGTTTTTACCTTAGAGGCGGTATTGCCGGCGCTTACAAAGGCACAAGGCC
GAGTGGTGGCGCTTGGCTCTGCCTCCGCTTATGTCCCCTTCGCTCGAGCTGAAGGCTATGGCAGCTCAAAAGCGGCGATA
CATTATCTAATGCAGGCCTTACAAATCAGCTTAAAGCCACTGGATGTCAACGTCAGCTTAGCCATACCAGGCTTTGTTGA
AACCCCAATGACAGATCACAACAACTTTATCATGCCTTTTTTACAAACCCCTAAACAAGCCAGCCTAGCCATACGTCAAG
GCATTAGAAACCATCAACAAATTATTGCGTTCCCAAAACAGCTGACTGTTCCGCTAAAGACTTTAGGTATATTGCCTAAC
AGTGTCTGGCAGTTTGTGTCTAGCAAGCTATATGCCAATCGATAA

Upstream 100 bases:

>100_bases
TAATGGTGTGATTCATGTGATTGATAAAGTGCTGTTACCCTAAGGCCCTCGCTAATTATCTTAAATTAGCTGATAACCCT
TGCCCATTAAAGAGACCACA

Downstream 100 bases:

>100_bases
GTATCAAAACAGATCACAAATAAATTTAGACAACGCTCTAAAGCATAACGATAACAAGAGATACTTTATGACCCAGTTAC
AATCCGCCAGCCCCAATCCC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSTRILITGATSGMGYQLAVDYLQAGHVVYAAGRNQEALNKLGRLGAVSICVDLTDYHQVMQAFGDIDALDIVICCAGVC
HYIDITPDTSVSEPSGCNFGFDGQNIMHTINTNLSTLVFTLEAVLPALTKAQGRVVALGSASAYVPFARAEGYGSSKAAI
HYLMQALQISLKPLDVNVSLAIPGFVETPMTDHNNFIMPFLQTPKQASLAIRQGIRNHQQIIAFPKQLTVPLKTLGILPN
SVWQFVSSKLYANR

Sequences:

>Translated_254_residues
MSTRILITGATSGMGYQLAVDYLQAGHVVYAAGRNQEALNKLGRLGAVSICVDLTDYHQVMQAFGDIDALDIVICCAGVC
HYIDITPDTSVSEPSGCNFGFDGQNIMHTINTNLSTLVFTLEAVLPALTKAQGRVVALGSASAYVPFARAEGYGSSKAAI
HYLMQALQISLKPLDVNVSLAIPGFVETPMTDHNNFIMPFLQTPKQASLAIRQGIRNHQQIIAFPKQLTVPLKTLGILPN
SVWQFVSSKLYANR
>Mature_253_residues
STRILITGATSGMGYQLAVDYLQAGHVVYAAGRNQEALNKLGRLGAVSICVDLTDYHQVMQAFGDIDALDIVICCAGVCH
YIDITPDTSVSEPSGCNFGFDGQNIMHTINTNLSTLVFTLEAVLPALTKAQGRVVALGSASAYVPFARAEGYGSSKAAIH
YLMQALQISLKPLDVNVSLAIPGFVETPMTDHNNFIMPFLQTPKQASLAIRQGIRNHQQIIAFPKQLTVPLKTLGILPNS
VWQFVSSKLYANR

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Drosophila melanogaster, GI23397609, Length=201, Percent_Identity=31.8407960199005, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27415; Mature: 27284

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRILITGATSGMGYQLAVDYLQAGHVVYAAGRNQEALNKLGRLGAVSICVDLTDYHQV
CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEEEEEEHHHHHHH
MQAFGDIDALDIVICCAGVCHYIDITPDTSVSEPSGCNFGFDGQNIMHTINTNLSTLVFT
HHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
LEAVLPALTKAQGRVVALGSASAYVPFARAEGYGSSKAAIHYLMQALQISLKPLDVNVSL
HHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEE
AIPGFVETPMTDHNNFIMPFLQTPKQASLAIRQGIRNHQQIIAFPKQLTVPLKTLGILPN
ECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHEECCHHHCCCHHHHHCCHH
SVWQFVSSKLYANR
HHHHHHHHHHHCCC
>Mature Secondary Structure 
STRILITGATSGMGYQLAVDYLQAGHVVYAAGRNQEALNKLGRLGAVSICVDLTDYHQV
CCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEEEEEEHHHHHHH
MQAFGDIDALDIVICCAGVCHYIDITPDTSVSEPSGCNFGFDGQNIMHTINTNLSTLVFT
HHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
LEAVLPALTKAQGRVVALGSASAYVPFARAEGYGSSKAAIHYLMQALQISLKPLDVNVSL
HHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEE
AIPGFVETPMTDHNNFIMPFLQTPKQASLAIRQGIRNHQQIIAFPKQLTVPLKTLGILPN
ECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHEECCHHHCCCHHHHHCCHH
SVWQFVSSKLYANR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]