Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is yghU [H]

Identifier: 148652952

GI number: 148652952

Start: 1401765

End: 1402616

Strand: Direct

Name: yghU [H]

Synonym: PsycPRwf_1146

Alternate gene names: 148652952

Gene position: 1401765-1402616 (Clockwise)

Preceding gene: 148652949

Following gene: 148652953

Centisome position: 47.06

GC content: 46.01

Gene sequence:

>852_bases
ATGAGCTCAAACAACACCTTAAATAACACCTTAAATAATGCCAATACAGATTATGTGCCCCCTAAAGTGTGGCAGCCGGT
AGAGGGTAATGGCGGCAAGTTTGCCAATACCAACAAGCCCACAGCAGGCGCCCGTCATCAGCAAACTCTACCCAAAGGCG
ACAATCCCCTACAGCTGTATTCGCTGAACACGCCCAATGGCATTAAGGTAAATATATTGTTAGAGGAGCTCGCTGAGCTT
GGCATAGAGTCGGCTAAGTATGATGCCTATAAAATTGACATTATGGAGAATGATCAATTCGGCTCAGACTTCGTGGAGAT
TAATCCAAACTCTAAAATTCCTGCACTTATCGATTACTCTGATGCCAGCAATCCGGTCAAATTGTTTGAATCGGGCGCCA
TCTTGATGTATTTGGCAGAAAAATTTAATAAATTTAAGCCACAAAACACACAAACCCAAAAATACGCCACCTATCTAAGC
TGGGTGATGTGGCAAATGGGTAGCGCGCCTTATTTGGGCGGCGGTTTTGGTCATTTCTTTAGCTATGCGCCATATCCGAT
GCAGTATCCCATTGACAGATTTACGATGGAGACCAAACGACAATTAGATTTGCTAGATAAGCACTTAGCCCACCATGAAT
ATATGATTGGCGATGGCGAGGACAACTATAGCGTGGCTGATATGCTCATCTGGCCTTGGTATGGCCGCTTGGCGTTGGAT
GAGTCGTATGAGCGCGCTGGAGAATTCTTGCAAGTGGACAGCTACACCCATCTACAGCGCTGGGCGAAGCAAATCTCTAC
ACGTCCTGCGGTACAGCGTGCGGTCAACCTTGAGCTAAAGCCGATTAAATAA

Upstream 100 bases:

>100_bases
TGTAACTGAACTTAACCAAAAAATTGTTTATGATAGGCTAAATCAAAACATATAAAGCCCATAACGCCTCAATAACACGT
TAATAAAAAAAGGACTTATC

Downstream 100 bases:

>100_bases
CTGTCTTTAAAGTAACTATCTTTAAAATAGCAAACTTTCAAATAGTAAGCTTTAAAATAGCTCGCTTTAAGACAGTAAAT
TTTAAGATAGCAAATAGCGT

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAEL
GIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLS
WVMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD
ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK

Sequences:

>Translated_283_residues
MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAEL
GIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLS
WVMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD
ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK
>Mature_282_residues
SSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAELG
IESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSW
VMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALDE
SYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=257, Percent_Identity=54.863813229572, Blast_Score=292, Evalue=1e-80,
Organism=Escherichia coli, GI1788640, Length=221, Percent_Identity=37.10407239819, Blast_Score=137, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324100, Length=263, Percent_Identity=25.0950570342205, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 32235; Mature: 32103

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLY
CCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE
SLNTPNGIKVNILLEELAELGIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYS
EECCCCCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECC
DASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSWVMWQMGSAPYLGGGFGHFF
CCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEC
ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK
CCHHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHCCEEECCC
>Mature Secondary Structure 
SSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLY
CCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE
SLNTPNGIKVNILLEELAELGIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYS
EECCCCCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECC
DASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSWVMWQMGSAPYLGGGFGHFF
CCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEC
ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK
CCHHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]