| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yghU [H]
Identifier: 148652952
GI number: 148652952
Start: 1401765
End: 1402616
Strand: Direct
Name: yghU [H]
Synonym: PsycPRwf_1146
Alternate gene names: 148652952
Gene position: 1401765-1402616 (Clockwise)
Preceding gene: 148652949
Following gene: 148652953
Centisome position: 47.06
GC content: 46.01
Gene sequence:
>852_bases ATGAGCTCAAACAACACCTTAAATAACACCTTAAATAATGCCAATACAGATTATGTGCCCCCTAAAGTGTGGCAGCCGGT AGAGGGTAATGGCGGCAAGTTTGCCAATACCAACAAGCCCACAGCAGGCGCCCGTCATCAGCAAACTCTACCCAAAGGCG ACAATCCCCTACAGCTGTATTCGCTGAACACGCCCAATGGCATTAAGGTAAATATATTGTTAGAGGAGCTCGCTGAGCTT GGCATAGAGTCGGCTAAGTATGATGCCTATAAAATTGACATTATGGAGAATGATCAATTCGGCTCAGACTTCGTGGAGAT TAATCCAAACTCTAAAATTCCTGCACTTATCGATTACTCTGATGCCAGCAATCCGGTCAAATTGTTTGAATCGGGCGCCA TCTTGATGTATTTGGCAGAAAAATTTAATAAATTTAAGCCACAAAACACACAAACCCAAAAATACGCCACCTATCTAAGC TGGGTGATGTGGCAAATGGGTAGCGCGCCTTATTTGGGCGGCGGTTTTGGTCATTTCTTTAGCTATGCGCCATATCCGAT GCAGTATCCCATTGACAGATTTACGATGGAGACCAAACGACAATTAGATTTGCTAGATAAGCACTTAGCCCACCATGAAT ATATGATTGGCGATGGCGAGGACAACTATAGCGTGGCTGATATGCTCATCTGGCCTTGGTATGGCCGCTTGGCGTTGGAT GAGTCGTATGAGCGCGCTGGAGAATTCTTGCAAGTGGACAGCTACACCCATCTACAGCGCTGGGCGAAGCAAATCTCTAC ACGTCCTGCGGTACAGCGTGCGGTCAACCTTGAGCTAAAGCCGATTAAATAA
Upstream 100 bases:
>100_bases TGTAACTGAACTTAACCAAAAAATTGTTTATGATAGGCTAAATCAAAACATATAAAGCCCATAACGCCTCAATAACACGT TAATAAAAAAAGGACTTATC
Downstream 100 bases:
>100_bases CTGTCTTTAAAGTAACTATCTTTAAAATAGCAAACTTTCAAATAGTAAGCTTTAAAATAGCTCGCTTTAAGACAGTAAAT TTTAAGATAGCAAATAGCGT
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAEL GIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLS WVMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK
Sequences:
>Translated_283_residues MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAEL GIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLS WVMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK >Mature_282_residues SSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLYSLNTPNGIKVNILLEELAELG IESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYSDASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSW VMWQMGSAPYLGGGFGHFFSYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALDE SYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=257, Percent_Identity=54.863813229572, Blast_Score=292, Evalue=1e-80, Organism=Escherichia coli, GI1788640, Length=221, Percent_Identity=37.10407239819, Blast_Score=137, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324100, Length=263, Percent_Identity=25.0950570342205, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32235; Mature: 32103
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLY CCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE SLNTPNGIKVNILLEELAELGIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYS EECCCCCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECC DASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSWVMWQMGSAPYLGGGFGHFF CCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEC ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK CCHHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHCCEEECCC >Mature Secondary Structure SSNNTLNNTLNNANTDYVPPKVWQPVEGNGGKFANTNKPTAGARHQQTLPKGDNPLQLY CCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEE SLNTPNGIKVNILLEELAELGIESAKYDAYKIDIMENDQFGSDFVEINPNSKIPALIDYS EECCCCCEEEEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEECC DASNPVKLFESGAILMYLAEKFNKFKPQNTQTQKYATYLSWVMWQMGSAPYLGGGFGHFF CCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SYAPYPMQYPIDRFTMETKRQLDLLDKHLAHHEYMIGDGEDNYSVADMLIWPWYGRLALD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEECCCCCEEEC ESYERAGEFLQVDSYTHLQRWAKQISTRPAVQRAVNLELKPIK CCHHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]